Genomic and phylodynamic analysis of sapoviruses isolated in Henan Province, China.
Journal
Archives of virology
ISSN: 1432-8798
Titre abrégé: Arch Virol
Pays: Austria
ID NLM: 7506870
Informations de publication
Date de publication:
Jan 2021
Jan 2021
Historique:
received:
01
07
2020
accepted:
28
09
2020
pubmed:
10
11
2020
medline:
22
1
2021
entrez:
9
11
2020
Statut:
ppublish
Résumé
In this study, we determined the near-complete and partial genome sequences of ten SaV isolates. Phylogenetic analysis based on full-length VP1 and RdRp nucleotide sequences indicated that nine isolates were of GI.1 and one was GII.3. Evolutionary dynamics analysis indicated that GI.1 and GII.3 SaVs evolved at different rates, the latter evolving more rapidly. Cluster analysis indicated that distantly related GI.1 SaVs were more similar in their amino acid compositions than were GII.3 SaVs. The data provided in this study may facilitate studies on SaV genomic diversity and epidemiological patterns in China and worldwide.
Identifiants
pubmed: 33164116
doi: 10.1007/s00705-020-04876-0
pii: 10.1007/s00705-020-04876-0
doi:
Substances chimiques
RNA, Viral
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
265-270Références
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