CrAssphage and its bacterial host in cat feces.


Journal

Scientific reports
ISSN: 2045-2322
Titre abrégé: Sci Rep
Pays: England
ID NLM: 101563288

Informations de publication

Date de publication:
12 01 2021
Historique:
received: 16 10 2020
accepted: 14 12 2020
entrez: 13 1 2021
pubmed: 14 1 2021
medline: 26 8 2021
Statut: epublish

Résumé

CrAssphages are a diverse group of related phages detected in human feces where they are the most prevalent and abundant prokaryotic virus. CrAssphages' cellular host has been identified as the anaerobic Bacteroides intestinalis. CrAssphage has also been reported in non-human primates and environmental samples and has been proposed as a marker of human fecal contamination. Here we describe crAssphage DNA in a feline fecal sample. 95% of the ~ 100 Kb genome could be assembled and classified in genus 1 of the recently proposed Alphacrassvirinae subfamily. The cat origin of the fecal sample was confirmed by partial mitochondrial DNA sequencing. High levels of Bacteroides intestinalis DNA could also be detected in this cat's feces. Fecal samples longitudinally collected over a 4-week period showed the continuous shedding of crAssphage DNA. We therefore report the first genome sequence-confirmed detection of crAssphage in fecal samples of a non-primate mammal.

Identifiants

pubmed: 33436756
doi: 10.1038/s41598-020-80076-9
pii: 10.1038/s41598-020-80076-9
pmc: PMC7804022
doi:

Substances chimiques

Sewage 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

815

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Auteurs

Yanpeng Li (Y)

Vitalant Research Institute, 270 Masonic Avenue, San Francisco, CA, 94118, USA.
Department of Laboratory Medicine, University of California, San Francisco, CA, 94118, USA.

Emilia Gordon (E)

The British Columbia Society for the Prevention of Cruelty to Animals, Vancouver, BC, V5T 1R1, Canada.

Ryan C Shean (RC)

Department of Laboratory Medicine and Pathology, University of Washington Medical Center, Seattle, WA, 98195, USA.

Amanda Idle (A)

The British Columbia Society for the Prevention of Cruelty to Animals, Vancouver, BC, V5T 1R1, Canada.

Xutao Deng (X)

Vitalant Research Institute, 270 Masonic Avenue, San Francisco, CA, 94118, USA.
Department of Laboratory Medicine, University of California, San Francisco, CA, 94118, USA.

Alexander L Greninger (AL)

Department of Laboratory Medicine and Pathology, University of Washington Medical Center, Seattle, WA, 98195, USA.

Eric Delwart (E)

Vitalant Research Institute, 270 Masonic Avenue, San Francisco, CA, 94118, USA. eric.delwart@ucsf.edu.
Department of Laboratory Medicine, University of California, San Francisco, CA, 94118, USA. eric.delwart@ucsf.edu.

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Classifications MeSH