Nanobody generation and structural characterization of Plasmodium falciparum 6-cysteine protein Pf12p.
Amino Acid Sequence
Animals
Antigens, Protozoan
/ chemistry
Binding Sites
Blotting, Western
Camelids, New World
/ immunology
Crystallography, X-Ray
Enzyme-Linked Immunosorbent Assay
Epitopes
/ immunology
Interferometry
Models, Molecular
Peptide Fragments
/ genetics
Plasmodium falciparum
/ metabolism
Protein Conformation
Protein Domains
Protein Interaction Mapping
Recombinant Proteins
/ metabolism
Sequence Alignment
Sequence Homology, Amino Acid
Single-Domain Antibodies
/ biosynthesis
6-cysteine proteins
malaria
nanobody
Journal
The Biochemical journal
ISSN: 1470-8728
Titre abrégé: Biochem J
Pays: England
ID NLM: 2984726R
Informations de publication
Date de publication:
12 02 2021
12 02 2021
Historique:
received:
01
12
2020
revised:
20
01
2021
accepted:
22
01
2021
pubmed:
23
1
2021
medline:
22
6
2021
entrez:
22
1
2021
Statut:
ppublish
Résumé
Surface-associated proteins play critical roles in the Plasmodium parasite life cycle and are major targets for vaccine development. The 6-cysteine (6-cys) protein family is expressed in a stage-specific manner throughout Plasmodium falciparum life cycle and characterized by the presence of 6-cys domains, which are β-sandwich domains with conserved sets of disulfide bonds. Although several 6-cys family members have been implicated to play a role in sexual stages, mosquito transmission, evasion of the host immune response and host cell invasion, the precise function of many family members is still unknown and structural information is only available for four 6-cys proteins. Here, we present to the best of our knowledge, the first crystal structure of the 6-cys protein Pf12p determined at 2.8 Å resolution. The monomeric molecule folds into two domains, D1 and D2, both of which adopt the canonical 6-cys domain fold. Although the structural fold is similar to that of Pf12, its paralog in P. falciparum, we show that Pf12p does not complex with Pf41, which is a known interaction partner of Pf12. We generated 10 distinct Pf12p-specific nanobodies which map into two separate epitope groups; one group which binds within the D2 domain, while several members of the second group bind at the interface of the D1 and D2 domain of Pf12p. Characterization of the structural features of the 6-cys family and their associated nanobodies provide a framework for generating new tools to study the diverse functions of the 6-cys protein family in the Plasmodium life cycle.
Identifiants
pubmed: 33480416
pii: 227640
doi: 10.1042/BCJ20200415
pmc: PMC7886318
doi:
Substances chimiques
Antigens, Protozoan
0
Epitopes
0
Peptide Fragments
0
Pf12 antigen, Plasmodium falciparum
0
Pf41 antigen, Plasmodium falciparum
0
Recombinant Proteins
0
Single-Domain Antibodies
0
Types de publication
Comparative Study
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
579-595Subventions
Organisme : Wellcome Trust
ID : 208693/Z/17/Z
Pays : United Kingdom
Informations de copyright
© 2021 The Author(s).
Références
Protein Sci. 2020 Jan;29(1):128-140
pubmed: 31606894
PLoS One. 2015 Sep 28;10(9):e0139407
pubmed: 26414347
PLoS Pathog. 2008 Oct;4(10):e1000195
pubmed: 18974882
Nat Protoc. 2014 Mar;9(3):674-93
pubmed: 24577359
Mol Cell Proteomics. 2006 Jul;5(7):1286-99
pubmed: 16603573
Mol Biochem Parasitol. 1995 May;71(2):203-10
pubmed: 7477102
Expert Rev Vaccines. 2017 Apr;16(4):329-336
pubmed: 28043178
Science. 2015 Nov 27;350(6264):1089-92
pubmed: 26612952
Nucleic Acids Res. 2015 Jul 1;43(W1):W314-9
pubmed: 25908787
PLoS One. 2012;7(7):e41937
pubmed: 22848665
J Biol Chem. 2005 Dec 2;280(48):40169-76
pubmed: 16203726
Front Cell Infect Microbiol. 2018 Nov 27;8:413
pubmed: 30547015
Parasite Immunol. 1987 May;9(3):321-35
pubmed: 3299225
PLoS Pathog. 2013;9(8):e1003488
pubmed: 23990777
Proc Natl Acad Sci U S A. 2020 Feb 4;117(5):2597-2605
pubmed: 31969456
Mol Cell Proteomics. 2013 May;12(5):1127-43
pubmed: 23325771
Sci Transl Med. 2014 Jul 30;6(247):247ra102
pubmed: 25080477
Vaccine. 2009 Jun 19;27(30):3953-62
pubmed: 19389446
Parasite Immunol. 2003 Jul;25(7):351-9
pubmed: 14521577
Proc Natl Acad Sci U S A. 2005 Sep 20;102(38):13598-603
pubmed: 16155126
Proc Biol Sci. 2015 May 7;282(1806):20143027
pubmed: 25854886
Elife. 2017 May 16;6:
pubmed: 28506360
Proc Natl Acad Sci U S A. 2012 Apr 24;109(17):6692-7
pubmed: 22493233
Science. 1998 Nov 6;282(5391):1126-32
pubmed: 9804551
Nucleic Acids Res. 2009 Jan;37(Database issue):D539-43
pubmed: 18957442
J Immunol. 2013 Jul 15;191(2):795-809
pubmed: 23776179
J Biol Chem. 2013 May 3;288(18):12805-17
pubmed: 23511632
Mol Biochem Parasitol. 1992 Jul;53(1-2):113-20
pubmed: 1380124
FASEB J. 2014 May;28(5):2158-70
pubmed: 24509910
Mol Biochem Parasitol. 1999 Jun 25;101(1-2):223-7
pubmed: 10413057
Nat Struct Biol. 2002 Aug;9(8):606-11
pubmed: 12091874
PLoS Pathog. 2010 Apr 08;6(4):e1000853
pubmed: 20386715
mBio. 2012 Nov 13;3(6):
pubmed: 23149485
Mol Microbiol. 2006 Aug;61(4):991-8
pubmed: 16879650
Acta Crystallogr D Biol Crystallogr. 2010 Apr;66(Pt 4):486-501
pubmed: 20383002
J Biol Chem. 2009 Apr 3;284(14):9192-8
pubmed: 19155215
Mol Biochem Parasitol. 2006 Oct;149(2):216-22
pubmed: 16824624
Acta Crystallogr D Biol Crystallogr. 2012 Apr;68(Pt 4):352-67
pubmed: 22505256
Infect Immun. 1998 May;66(5):2237-44
pubmed: 9573113
Acta Crystallogr D Biol Crystallogr. 2002 Nov;58(Pt 11):1948-54
pubmed: 12393927
Acta Crystallogr D Biol Crystallogr. 2010 Feb;66(Pt 2):125-32
pubmed: 20124692
Nat Commun. 2018 Oct 26;9(1):4458
pubmed: 30367064
J Biol Chem. 2010 Apr 16;285(16):12063-70
pubmed: 20164173
Commun Biol. 2020 Jul 24;3(1):395
pubmed: 32709983
Am J Trop Med Hyg. 1991 Jun;44(6):623-31
pubmed: 1713424
J Immunol. 2016 Feb 1;196(3):1239-48
pubmed: 26700768
Mol Biochem Parasitol. 2001 Dec;118(2):147-54
pubmed: 11738705
Science. 2013 May 24;340(6135):984-7
pubmed: 23661646
Parasite Immunol. 1990 Nov;12(6):587-603
pubmed: 1707506
J Appl Crystallogr. 2007 Aug 1;40(Pt 4):658-674
pubmed: 19461840
Cell. 2001 Jan 12;104(1):153-64
pubmed: 11163248
Nat Commun. 2018 Sep 20;9(1):3822
pubmed: 30237518
J Mol Biol. 2005 Nov 25;354(2):447-58
pubmed: 16242717