A framework based on fundamental biochemical principles to engineer microbial community dynamics.

Kinetics Microbiota

Journal

Current opinion in biotechnology
ISSN: 1879-0429
Titre abrégé: Curr Opin Biotechnol
Pays: England
ID NLM: 9100492

Informations de publication

Date de publication:
02 2021
Historique:
received: 30 07 2020
revised: 18 12 2020
accepted: 03 01 2021
pubmed: 5 2 2021
medline: 27 4 2021
entrez: 4 2 2021
Statut: ppublish

Résumé

Microbial communities are complex but there are basic principles we can apply to constrain the assumed stochasticity of their activity. By understanding the trade-offs behind the kinetic parameters that define microbial growth, we can explain how local interspecies dependencies arise and shape the emerging properties of a community. If we integrate these theoretical descriptions with experimental 'omics' data and bioenergetics analysis of specific environmental conditions, predictions on activity, assembly and spatial structure can be obtained reducing the a priori unpredictable complexity of microbial communities. This information can be used to define the appropriate selective pressures to engineer bioprocesses and propose new hypotheses which can drive experimental research to accelerate innovation in biotechnology.

Identifiants

DOI: 10.1016/j.copbio.2021.01.001 PMID: 33540361
pubmed: 33540361
pii: S0958-1669(21)00002-1
doi: 10.1016/j.copbio.2021.01.001
pii:
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

111-118

Informations de copyright

Copyright © 2021 Elsevier Ltd. All rights reserved.

Auteurs

Rebeca González-Cabaleiro (R)

James Watt School of Engineering, Infrastructure and Environment Research Division, University of Glasgow, Rankine Building, Glasgow, G12 8LT, UK. Electronic address: rebeca.gonzalez-cabaleiro@glasgow.ac.uk.

Eloi Martinez-Rabert (E)

James Watt School of Engineering, Infrastructure and Environment Research Division, University of Glasgow, Rankine Building, Glasgow, G12 8LT, UK.

Lucia Argiz (L)

CRETUS Institute, Department of Chemical Engineering, Universidade de Santiago de Compostela, 15782 Santiago de Compostela, Galicia, Spain.

Maartje Ahj van Kessel (MA)

Radboud University, Department of Microbiology, Institute of Water and Wetland Research, Radboud University, Nijmegen, The Netherlands.

Cindy J Smith (CJ)

James Watt School of Engineering, Infrastructure and Environment Research Division, University of Glasgow, Rankine Building, Glasgow, G12 8LT, UK.

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Classifications MeSH

questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Cinétique › A framework based on fundamental biochemical...
questionsmedicales.fr › Environnement et santé publique › Environnement › Écosystème › Biodiversité › Biote › Microbiote › A framework based on fundamental biochemical...