Integrative molecular characterization of sarcomatoid and rhabdoid renal cell carcinoma.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
05 02 2021
Historique:
received: 19 05 2020
accepted: 04 01 2021
entrez: 6 2 2021
pubmed: 7 2 2021
medline: 18 2 2021
Statut: epublish

Résumé

Sarcomatoid and rhabdoid (S/R) renal cell carcinoma (RCC) are highly aggressive tumors with limited molecular and clinical characterization. Emerging evidence suggests immune checkpoint inhibitors (ICI) are particularly effective for these tumors, although the biological basis for this property is largely unknown. Here, we evaluate multiple clinical trial and real-world cohorts of S/R RCC to characterize their molecular features, clinical outcomes, and immunologic characteristics. We find that S/R RCC tumors harbor distinctive molecular features that may account for their aggressive behavior, including BAP1 mutations, CDKN2A deletions, and increased expression of MYC transcriptional programs. We show that these tumors are highly responsive to ICI and that they exhibit an immune-inflamed phenotype characterized by immune activation, increased cytotoxic immune infiltration, upregulation of antigen presentation machinery genes, and PD-L1 expression. Our findings build on prior work and shed light on the molecular drivers of aggressivity and responsiveness to ICI of S/R RCC.

Identifiants

pubmed: 33547292
doi: 10.1038/s41467-021-21068-9
pii: 10.1038/s41467-021-21068-9
pmc: PMC7865061
doi:

Substances chimiques

Antineoplastic Agents, Immunological 0
B7-H1 Antigen 0
BAP1 protein, human 0
CD274 protein, human 0
CDKN2A protein, human 0
CTLA-4 Antigen 0
CTLA4 protein, human 0
Cyclin-Dependent Kinase Inhibitor p16 0
Immune Checkpoint Inhibitors 0
Immune Checkpoint Proteins 0
MYC protein, human 0
PDCD1 protein, human 0
Programmed Cell Death 1 Receptor 0
Proto-Oncogene Proteins c-myc 0
Tumor Suppressor Proteins 0
Ubiquitin Thiolesterase EC 3.4.19.12

Types de publication

Clinical Trial Journal Article Multicenter Study Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't Research Support, U.S. Gov't, P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

808

Subventions

Organisme : NCI NIH HHS
ID : P50 CA101942
Pays : United States
Organisme : NCI NIH HHS
ID : F31 CA250136
Pays : United States
Organisme : NCI NIH HHS
ID : R50 CA211482
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA227388
Pays : United States
Organisme : NCI NIH HHS
ID : R01 CA224917
Pays : United States

Commentaires et corrections

Type : CommentIn

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Auteurs

Ziad Bakouny (Z)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

David A Braun (DA)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Sachet A Shukla (SA)

Translational Immunogenomics Laboratory, Dana-Farber Cancer Institute, Boston, MA, USA.

Wenting Pan (W)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Xin Gao (X)

Department of Medicine, Massachusetts General Hospital Cancer Center, Boston, MA, USA.

Yue Hou (Y)

Translational Immunogenomics Laboratory, Dana-Farber Cancer Institute, Boston, MA, USA.

Abdallah Flaifel (A)

Department of Pathology, Brigham and Women's Hospital, Boston, MA, USA.

Stephen Tang (S)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Alice Bosma-Moody (A)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Meng Xiao He (MX)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Natalie Vokes (N)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Jackson Nyman (J)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Wanling Xie (W)

Department of Data Sciences, Dana-Farber Cancer Institute, Boston, MA, USA.

Amin H Nassar (AH)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Sarah Abou Alaiwi (S)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Ronan Flippot (R)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Gabrielle Bouchard (G)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

John A Steinharter (JA)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Pier Vitale Nuzzo (PV)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Miriam Ficial (M)

Department of Pathology, Brigham and Women's Hospital, Boston, MA, USA.

Miriam Sant'Angelo (M)

Department of Pathology, Brigham and Women's Hospital, Boston, MA, USA.

Juliet Forman (J)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Translational Immunogenomics Laboratory, Dana-Farber Cancer Institute, Boston, MA, USA.
Broad Institute of MIT and Harvard, Cambridge, MA, USA.

Jacob E Berchuck (JE)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Shaan Dudani (S)

Tom Baker Cancer Centre, University of Calgary, Calgary, AB, Canada.

Kevin Bi (K)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Jihye Park (J)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Sabrina Camp (S)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Maura Sticco-Ivins (M)

Department of Pathology, Brigham and Women's Hospital, Boston, MA, USA.

Laure Hirsch (L)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Sylvan C Baca (SC)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Megan Wind-Rotolo (M)

Bristol-Myers Squibb, Princeton, NJ, USA.

Petra Ross-Macdonald (P)

Bristol-Myers Squibb, Princeton, NJ, USA.

Maxine Sun (M)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Gwo-Shu Mary Lee (GM)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Steven L Chang (SL)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Xiao X Wei (XX)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Bradley A McGregor (BA)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Lauren C Harshman (LC)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Giannicola Genovese (G)

Department of Genomic Medicine, The University of Texas MD Anderson Cancer Center, Houston, TX, USA.

Leigh Ellis (L)

Department of Pathology, Brigham and Women's Hospital, Boston, MA, USA.
Department of Oncologic Pathology, Dana-Farber Cancer Institute, Boston, MA, USA.

Mark Pomerantz (M)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Michelle S Hirsch (MS)

Department of Pathology, Brigham and Women's Hospital, Boston, MA, USA.

Matthew L Freedman (ML)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Michael B Atkins (MB)

Lombardi Comprehensive Cancer Center, Georgetown University Medical Center, Washington, DC, USA.

Catherine J Wu (CJ)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.
Broad Institute of MIT and Harvard, Cambridge, MA, USA.

Thai H Ho (TH)

Division of Hematology and Medical Oncology, Mayo Clinic, Scottsdale, AZ, USA.

W Marston Linehan (WM)

Urologic Oncology Branch, Center for Cancer Research, National Cancer Institute, NIH, Bethesda, MD, USA.

David F McDermott (DF)

Beth Israel Deaconess Medical Center, Boston, MA, USA.

Daniel Y C Heng (DYC)

Tom Baker Cancer Centre, University of Calgary, Calgary, AB, Canada.

Srinivas R Viswanathan (SR)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA.

Sabina Signoretti (S)

Department of Pathology, Brigham and Women's Hospital, Boston, MA, USA.
Department of Oncologic Pathology, Dana-Farber Cancer Institute, Boston, MA, USA.

Eliezer M Van Allen (EM)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. eliezerm_vanallen@dfci.harvard.edu.

Toni K Choueiri (TK)

Department of Medical Oncology, Dana-Farber Cancer Institute, Boston, MA, USA. Toni_Choueiri@dfci.harvard.edu.

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Classifications MeSH