HR-MAS NMR Applications in Plant Metabolomics.
HR-MAS NMR
metabolomics
multivariate analysis
plants
Journal
Molecules (Basel, Switzerland)
ISSN: 1420-3049
Titre abrégé: Molecules
Pays: Switzerland
ID NLM: 100964009
Informations de publication
Date de publication:
10 Feb 2021
10 Feb 2021
Historique:
received:
22
12
2020
revised:
05
02
2021
accepted:
06
02
2021
entrez:
13
2
2021
pubmed:
14
2
2021
medline:
8
5
2021
Statut:
epublish
Résumé
Metabolomics is used to reduce the complexity of plants and to understand the underlying pathways of the plant phenotype. The metabolic profile of plants can be obtained by mass spectrometry or liquid-state NMR. The extraction of metabolites from the sample is necessary for both techniques to obtain the metabolic profile. This extraction step can be eliminated by making use of high-resolution magic angle spinning (HR-MAS) NMR. In this review, an HR-MAS NMR-based workflow is described in more detail, including used pulse sequences in metabolomics. The pre-processing steps of one-dimensional HR-MAS NMR spectra are presented, including spectral alignment, baseline correction, bucketing, normalisation and scaling procedures. We also highlight some of the models which can be used to perform multivariate analysis on the HR-MAS NMR spectra. Finally, applications of HR-MAS NMR in plant metabolomics are described and show that HR-MAS NMR is a powerful tool for plant metabolomics studies.
Identifiants
pubmed: 33578691
pii: molecules26040931
doi: 10.3390/molecules26040931
pmc: PMC7916392
pii:
doi:
Types de publication
Journal Article
Review
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Stichting voor Fundamenteel Onderzoek der Materie
ID : FOM23
Organisme : BioSolar Cells
ID : U2.3
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