Microbial fatty acid transport proteins and their biotechnological potential.


Journal

Biotechnology and bioengineering
ISSN: 1097-0290
Titre abrégé: Biotechnol Bioeng
Pays: United States
ID NLM: 7502021

Informations de publication

Date de publication:
06 2021
Historique:
revised: 08 01 2021
received: 16 07 2020
accepted: 24 02 2021
pubmed: 28 2 2021
medline: 31 12 2021
entrez: 27 2 2021
Statut: ppublish

Résumé

Fatty acid metabolism has been widely studied in various organisms. However, fatty acid transport has received less attention, even though it plays vital physiological roles, such as export of toxic free fatty acids or uptake of exogenous fatty acids. Hence, there are important knowledge gaps in how fatty acids cross biological membranes, and many mechanisms and proteins involved in these processes still need to be determined. The lack of information is more predominant in microorganisms, even though the identification of fatty acids transporters in these cells could lead to establishing new drug targets or improvements in microbial cell factories. This review provides a thorough analysis of the current information on fatty acid transporters in microorganisms, including bacteria, yeasts and microalgae species. Most available information relates to the model organisms Escherichia coli and Saccharomyces cerevisiae, but transport systems of other species are also discussed. Intracellular trafficking of fatty acids and their transport through organelle membranes in eukaryotic organisms is described as well. Finally, applied studies and engineering efforts using fatty acids transporters are presented to show the applied potential of these transporters and to stress the need for further identification of new transporters and their engineering.

Identifiants

pubmed: 33638355
doi: 10.1002/bit.27735
doi:

Substances chimiques

Bacterial Proteins 0
Fatty Acid Transport Proteins 0
Fungal Proteins 0
Plant Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't Review

Langues

eng

Sous-ensembles de citation

IM

Pagination

2184-2201

Informations de copyright

© 2021 Wiley Periodicals LLC.

Références

Adebusuyi, A. A., & Foght, J. M. (2011). An alternative physiological role for the EmhABC efflux pump in Pseudomonas fluorescens cLP6a. BMC Microbiology, 11, 252. https://doi.org/10.1186/1471-2180-11-252
Albertsen, M., Bellahn, I., Krämer, R., & Waffenschmidt, S. (2003). Localization and function of the yeast multidrug transporter Tpo1p. Journal of Biological Chemistry, 278(15), 12820-12825. https://doi.org/10.1074/jbc.M210715200
Allen, J. L., Ten-hage, L., & Leflaive, J. (2018). Regulation of fatty acid production and release in Benthic algae: Could parallel allelopathy be explained with plant defence theories? Microbial Ecology, 75, 609-621.
Alnaseri, H., Kuiack, R. C., Ferguson, K. A., Schneider, J. E. T., Heinrichs, D. E., & McGavin, M. J. (2019). DNA binding and sensor specificity of FarR, a novel tetr family regulator required for induction of the fatty acid efflux pump FarE in staphylococcus aureus. Journal of Bacteriology, 201(3), 1-16. https://doi.org/10.1128/JB.00602-18
Alvarez, H. M., Herrero, O. M., Silva, R. A., Hernández, M. A., Lanfranconi, M. P., & Villalba, M. S. (2019). Insights into the metabolism of oleaginous Rhodococcus spp. Applied and Environmental Microbiology, 85(18), 1-12. https://doi.org/10.1128/AEM.00498-19
Amorim Franco, T. M., & Blanchard, J. S. (2017). Bacterial branched-chain amino acid biosynthesis: Structures, mechanisms, and drugability. Biochemistry, 56(44), 5849-5865. https://doi.org/10.1021/acs.biochem.7b00849
Arhar, S., & Natter, K. (2019). Common aspects in the engineering of yeasts for fatty acid- and isoprene-based products. Biochimica et Biophysica Acta - Molecular and Cell Biology of Lipids, 1864(12), 158513. https://doi.org/10.1016/j.bbalip.2019.08.009
Azizan, A., & Black, P. N. (1994). Use of transposon TnphoA to identify genes for cell envelope proteins of Escherichia coli required for long-chain fatty acid transport: The periplasmic protein Tsp potentiates long-chain fatty acid transport. Journal of Bacteriology, 176(21), 6653-6662. https://doi.org/10.1128/jb.176.21.6653-6662.1994
Azizan, A., Sherin, D., DiRusso, C. C., & Black, P. N. (1999). Energetics underlying the process of long-chain fatty acid transport. Archives of Biochemistry and Biophysics, 365(2), 299-306. https://doi.org/10.1006/abbi.1999.1171
Bae, J. H., Park, B. G., Jung, E., Lee, P. G., & Kim, B. G. (2014). fadD deletion and fadL overexpression in Escherichia coli increase hydroxy long-chain fatty acid productivity. Applied Microbiology and Biotechnology, 98(21), 8917-8925. https://doi.org/10.1007/s00253-014-5974-2
Banchio, C., & Gramajo, H. C. (1997). Medium- and long-chain fatty acid uptake and utilization by Streptomyces coelicolor A3(2): First characterization of a Gram-positive bacterial system. Microbiology, 143(7), 2439-2447. https://doi.org/10.1099/00221287-143-7-2439
Bellefleur, M. P. A., Wanda, S. Y., & Curtiss, R. (2019). Characterizing active transportation mechanisms for free fatty acids and antibiotics in Synechocystis sp. PCC 6803. BMC Biotechnology, 19(1), 1-17. https://doi.org/10.1186/s12896-019-0500-3
Black, P. N., & Dirusso, C. C. (2003). Transmembrane movement of exogenous long-chain fatty acids: Proteins, enzymes, and vectorial esterification. Microbiology and Molecular Biology Reviews, 67(3), 1-11. https://doi.org/10.1128/MMBR.67.3.454
Borodina, I. (2019). Understanding metabolite transport gives an upper hand in strain development. Microbial Biotechnology, 12(1), 69-70. https://doi.org/10.1111/1751-7915.13347
Brouwer, K. L. R., Keppler, D., Hoffmaster, K. A., Bow, D. A. J., Cheng, Y., Lai, Y., Palm, J. E., Stieger, B., & Evers, R. (2013). In vitro methods to support transporter evaluation in drug discovery and development. Clinical Pharmacology and Therapeutics, 94(1), 95-112. https://doi.org/10.1038/clpt.2013.81
Calmes, R., & Deal, S. J. (1976). Fatty acid transport by the lipophilic bacterium Nocardia asteroides. Journal of Bacteriology, 126(2), 751-757. https://doi.org/10.1128/jb.126.2.751-757.1976
Chen, B., Ling, H., & Chang, M. W. (2013). Transporter engineering for improved tolerance against alkane biofuels in Saccharomyces cerevisiae. Biotechnology for Biofuels, 6(1), 1-10. https://doi.org/10.1186/1754-6834-6-21
Choi, J., Park, N., Hwang, S., Sohn, J. H., Kwak, I., Cho, K. K., & Choi, I. S. (2013). The antibacterial activity of various saturated and unsaturated fatty acids against several oral pathogens. Journal of Environmental Biology, 34(July), 673-676.
Claus, S., Jezierska, S., & Bogaert, I.N.A.V.an (2019). Protein-facilitated transport of hydrophobic molecules across the yeast plasma membrane. FEBS Letters, 593, 1508-1527. https://doi.org/10.1002/1873-3468.13469
Cronan, J. E. (2014). A new pathway of exogenous fatty acid incorporation proceeds by a classical phosphoryl transfer reaction. Molecular Microbiology, 92(2), 217-221. https://doi.org/10.1111/mmi.12558
Darwiche, R., El Atab, O., Cottier, S., & Schneiter, R. (2018). The function of yeast CAP family proteins in lipid export, mating, and pathogen defense. FEBS Letters, 592(8), 1304-1311. https://doi.org/10.1002/1873-3468.12909
Darwiche, R., Mène-Saffrané, L., Gfeller, D., Asojo, O. A., & Schneiter, R. (2017). The pathogen-related yeast protein Pry1, a member of the CAP protein superfamily, is a fatty acid-binding protein. Journal of Biological Chemistry, 292(20), 8304-8314. https://doi.org/10.1074/jbc.M117.781880
Davies, H. M., Anderson, L., Fan, C., & Hawkins, D. J. (1991). Developmental induction, purification, and further characterization of 12:0-ACP thioesterase from immature cotyledons of Umbellularia californica. Archives of Biochemistry and Biophysics, 290(1), 37-45. https://doi.org/10.1016/0003-9861(91)90588-A
DellaGreca, M., Zarrelli, A., Fergola, P., Cerasuolo, M., Pollio, A., & Pinto, G. (2010). Fatty acids released by Chlorella vulgaris and their role in interference with Pseudokirchneriella subcapitata: Experiments and modelling. Journal of Chemical Ecology, 36(3), 339-349. https://doi.org/10.1007/s10886-010-9753-y
Desbois, A. P., & Smith, V. J. (2010). Antibacterial free fatty acids: Activities, mechanisms of action and biotechnological potential. Applied Microbiology and Biotechnology, 85, 1629-1642. https://doi.org/10.1007/s00253-009-2355-3
DiRusso, C. C., & Black, P. N. (1999). Long-chain fatty acid transport in bacteria and yeast. Paradigms for defining the mechanism underlying this protein-mediated process. Molecular and Cellular Biochemistry, 192(1-2), 41-52. https://doi.org/10.1007/978-1-4615-4929-1_5
Dulermo, R., Gamboa-Meléndez, H., Dulermo, T., Thevenieau, F., & Nicaud, J. M. (2014). The fatty acid transport protein Fat1p is involved in the export of fatty acids from lipid bodies in Yarrowia lipolytica. FEMS Yeast Research, 14(6), 883-896. https://doi.org/10.1111/1567-1364.12177
Dulermo, R., Gamboa-meléndez, H., & Ledesma-amaro, R. (2015). Unraveling fatty acid transport and activation mechanisms in Yarrowia lipolytica. BBA-Molecular and Cell Biology of Lipids, 1851(9), 1202-1217. https://doi.org/10.1016/j.bbalip.2015.04.004
Dulermo, T., Thevenieau, F., & Nicaud, J. (2014). The fatty acid transport protein Fat1p is involved in the export of fatty acids from lipid bodies in Yarrowia lipolytica. FEMS Yeast Research, 14, 883-896. https://doi.org/10.1111/1567-1364.12177
Ekiert, D. C., Bhabha, G., Isom, G. L., Greenan, G., Henderson, I. R., Cox, J. S., & Vale, R. D. (2017). Architectures of lipid transport systems for the bacterial outer membrane. Cell, 169(2), 273-285. https://doi.org/10.1016/j.cell.2017.03.019.Architectures
Faergeman, N. J., DiRusso, C. C., Elberger, A., Knudsen, J., & Black, P. N. (1997). Disruption of the Saccharomyces cerevisiae homologue to the murine fatty acid transport protein impairs uptake and growth on long-chain fatty acids. Journal of Biological Chemistry, 272(13), 8531-8538. https://doi.org/10.1074/jbc.272.13.8531
Faergeman, N. J., & Knudsen, J. (1997). Role of long-chain fatty acyl-CoA esters in the regulation of metabolism and in cell signalling. Biochemical Journal, 323(1), 1-12. https://doi.org/10.1042/bj3230001
Fang, F., Dai, B., Zhao, G., Zhao, H., Sun, C., Liu, H., & Xian, M. (2016). In depth understanding the molecular response to the enhanced secretion of fatty acids in Saccharomyces cerevisiae due to one-step gene deletion of acyl-CoA synthetases. Process Biochemistry, 51(9), 1162-1174. https://doi.org/10.1016/j.procbio.2016.05.017
Feng, Y., & Cronan, J. E. (2009). A new member of the Escherichia coli fad Regulon: Transcriptional regulation of fadM (ybaW). Journal of Bacteriology, 191(20), 6320-6328. https://doi.org/10.1128/JB.00835-09
Fisher, M. A., Boyarskiy, S., Yamada, M. R., Kong, N., Bauer, S., & Tullman-Ercek, D. (2014). Enhancing tolerance to short-chain alcohols by engineering the Escherichia coli AcrB efflux pump to secrete the non-native substrate n-butanol. ACS Synthetic Biology, 3(1), 30-40. https://doi.org/10.1021/sb400065q
Fulda, M., Schnurr, J., Abbadi, A., Heinz, E., & Browse, J. (2004). Peroxisomal Acyl-CoA synthetase activity is essential for seedling development in Arabidopsis thaliana. The Plant Cell, 16(2), 393-405. https://doi.org/10.1105/tpc.019646
Futagi, Y., Kobayashi, M., Narumi, K., Furugen, A., & Iseki, K. (2019). Homology modeling and site-directed mutagenesis identify amino acid residues underlying the substrate selection mechanism of human monocarboxylate transporters 1 (hMCT1) and 4 (hMCT4). Cellular and Molecular Life Sciences, 76(24), 4905-4921. https://doi.org/10.1007/s00018-019-03151-z
Gerhardt, B. (1992). Fatty acid degradation in plants. Progress in Lipid Research, 31(4), 417-446.
Glatz, J. F. C. (2015). Lipids and lipid binding proteins: A perfect match. Prostaglandins Leukotrienes and Essential Fatty Acids, 93, 45-49. https://doi.org/10.1016/j.plefa.2014.07.011
Glatz, J. F. C., Luiken, J. J. F. P., & Bonen, A. (2010). Membrane fatty acid transporters as regulators of lipid metabolism: Implications for metabolic disease. Physiological Reviews, 90(1), 367-417. https://doi.org/10.1152/physrev.00003.2009
Hearn, E. M., Patel, D. R., Lepore, B. W., Indic, M., & Van Den Berg, B. (2009). Transmembrane passage of hydrophobic compounds through a protein channel wall. Nature, 458(7236), 367-370. https://doi.org/10.1038/nature07678
Herrero, O. M., Villalba, M. S., Lanfranconi, M. P., & Alvarez, H. M. (2018). Rhodococcus bacteria as a promising source of oils from olive mill wastes. World Journal of Microbiology and Biotechnology, 34(8), 1-10. https://doi.org/10.1007/s11274-018-2499-3
Hettema, E. H., van Roermund, C. W., Distel, B., van den Berg, M., Vilela, C., Rodrigues-Pousada, C., Wanders, R. J., & Tabak, H. F. (1996). The ABC transporter proteins Pat1 and Pat2 are required for import of long-chain fatty acids into peroxisomes of Saccharomyces cerevisiae. The EMBO Journal, 15(15), 3813-3822. https://doi.org/10.1002/j.1460-2075.1996.tb00755.x
Hu, Y., Zhu, Z., Nielsen, J., & Siewers, V. (2018). Heterologous transporter expression for improved fatty alcohol secretion in yeast. Metabolic Engineering, 45, 51-58. https://doi.org/10.1016/j.ymben.2017.11.008
Hu, Y., Zhu, Z., Nielsen, J., & Siewers, V. (2019). Engineering Saccharomyces cerevisiae cells for production of fatty acid-derived biofuels and chemicals. Open Biology, 9(5), 190049. https://doi.org/10.1098/rsob.190049
Huang, C. B., Alimova, Y., Myers, T. M., & Ebersole, J. L. (2011). Short- and medium-chain fatty acids exhibit antimicrobial activity for oral microorganisms. Archives of Oral Biology, 56(7), 650-654. https://doi.org/10.1016/j.archoralbio.2011.01.011
Jacquier, N., & Schneiter, R. (2010). Ypk1, the yeast orthologue of the human serum- and glucocorticoid-induced kinase, is required for efficient uptake of fatty acids. Journal of Cell Science, 123(13), 2218-2227. https://doi.org/10.1242/jcs.063073
Jeon, E. Y., Song, J. W., Cha, H. J., Lee, S. M., Lee, J., & Park, J. B. (2018). Intracellular transformation rates of fatty acids are influenced by expression of the fatty acid transporter FadL in Escherichia coli cell membrane. Journal of Biotechnology, 281(April), 161-167. https://doi.org/10.1016/j.jbiotec.2018.07.019
Jezierska, S., & Van Bogaert, I. N. A. (2017). Crossing boundaries: the importance of cellular membranes in industrial biotechnology. Journal of Industrial Microbiology and Biotechnology, 44(4-5), 721-733. https://doi.org/10.1007/s10295-016-1858-z
Jia, B., Song, Y., Wu, M., Lin, B., Xiao, K., Hu, Z., & Huang, Y. (2016). Characterization of long-chain acyl-CoA synthetases which stimulate secretion of fatty acids in green algae Chlamydomonas reinhardtii. Biotechnology for Biofuels, 9, 184. https://doi.org/10.1186/s13068-016-0598-7
Jiang, J. H., Hassan, K. A., Begg, S. L., Rupasinghe, T. W. T., Naidu, V., Pederick, V. G., Khorvash, M., Whittall, J. J., Paton, J. C., Paulsen, I. T., McDevitt, C. A., Peleg, A. Y., & Eijkelkamp, B. A. (2019). Identification of Novel Acinetobacter baumannii Host Fatty Acid Stress Adaptation Strategies. mBio, 10(1), 1-6. https://doi.org/10.1128/mBio.02056-18
Johnson, D. R., Knoll, L. J., Levin, D. E., & Gordon, J. I. (1994). Saccharomyces cerevisiae contains four fatty acid activation (FAA) genes: An assessment of their role in regulating protein N-myristoylation and cellular lipid metabolism. Journal of Cell Biology, 127(3), 751-762. https://doi.org/10.1083/jcb.127.3.751
Jones, T. H., & Kennedy, E. P. (1969). Characterization of the membrane protein component of the lactose transport system of Escherichia coli. Journal of Biological Chemistry, 244(21), 5981-5987.
Kang, M. K., & Tullman-Ercek, D. (2018). Engineering expression and function of membrane proteins. Methods, 147, 66-72. https://doi.org/10.1016/j.ymeth.2018.04.014
Kato, A., Takatani, N., Use, K., Uesaka, K., Ikeda, K., Chang, Y., Kojima, K., Aichi, M., Ihara, K., Nakahigashi, K., Maeda, S., & Omata, T. (2015). Identification of a cyanobacterial RND-type efflux system involved in export of free fatty acids. Plant and Cell Physiology, 56(12), 2467-2477. https://doi.org/10.1093/pcp/pcv150
Kell, D. B., Swainston, N., Pir, P., & Oliver, S. G. (2015). Membrane transporter engineering in industrial biotechnology and whole cell biocatalysis. Trends in Biotechnology, 33(4), 237-246. https://doi.org/10.1016/j.tibtech.2015.02.001
Kim, D., Choi, K. Y., Yoo, M., Zylstra, G. J., & Kim, E. (2018). Biotechnological potential of rhodococcus biodegradative pathways. Journal of Microbiology and Biotechnology, 28(7), 1037-1051. https://doi.org/10.4014/jmb.1712.12017
Kim, H. S., & Nikaido, H. (2012). Different functions of MdtB and MdtC subunits in the heterotrimeric efflux transporter MdtB2C complex of Escherichia coli. Biochemistry, 51(20), 4188-4197. https://doi.org/10.1021/bi300379y
Knoll, L. J., Johnson, D. R., & Gordon, J. I. (1994). Biochemical studies of three Saccharomyces cerevisiae acyl-CoA synthetases, Faa1p, Faa2p, and Faa3p. Journal of Biological Chemistry, 269(23), 16348-16356.
Kong, F., Liang, Y., Légeret, B., Beyly-Adriano, A., Blangy, S., Haslam, R. P., Napier, J. A., Beisson, F., Peltier, G., & Li-Beisson, Y. (2017). Chlamydomonas carries out fatty acid β-oxidation in ancestral peroxisomes using a bona fide acyl-CoA oxidase. Plant Journal, 90(2), 358-371. https://doi.org/10.1111/tpj.13498
Kong, F., Romero, I. T., Warakanont, J., & Li-Beisson, Y. (2018). Lipid catabolism in microalgae. New Phytologist, 218(4), 1340-1348. https://doi.org/10.1111/nph.15047
Lancet, D., Zidovetzki, R., & Markovitch, O. (2018). Systems protobiology: Origin of life in lipid catalytic networks. Journal of the Royal Society Interface, 15(144), https://doi.org/10.1098/rsif.2018.0159.
Lau, S. Y., & Zgurskaya, H. I. (2005). Cell division defects in Escherichia coli deficient in the multidrug efflux transporter AcrEF-TolC. Journal of Bacteriology, 187(22), 7815-7825. https://doi.org/10.1128/JB.187.22.7815
Lee, E. H., & Shafer, W. M. (1999). The farAB-encoded efflux pump mediates resistance of gonococci to long-chained antibacterial fatty acids. Molecular Microbiology, 33(4), 839-845. https://doi.org/10.1046/j.1365-2958.1999.01530.x
Legras, J. L., Erny, C., Le Jeune, C., Lollier, M., Adolphe, Y., Demuyter, C., Delobel, P., Blondin, B., & Karst, F. (2010). Activation of two different resistance mechanisms in Saccharomyces cerevisiae upon exposure to octanoic and decanoic acids. Applied and Environmental Microbiology, 76(22), 7526-7535. https://doi.org/10.1128/AEM.01280-10
Lennen, R. M., Kruziki, M. A., Kumar, K., Zinkel, R. A., Burnum, K. E., Lipton, M. S., Hoover, S. W., Ranatunga, D. R., Wittkopp, T. M., Marner, W. D., & Pfleger, B. F. (2011). Membrane stresses induced by overproduction of free fatty acids in Escherichia coli. Applied and Environmental Microbiology, 77(22), 8114-8128. https://doi.org/10.1128/AEM.05421-11
Lennen, R. M., Politz, M. G., Kruziki, M. A., & Pfleger, B. F. (2013). Identification of transport proteins involved in free fatty acid efflux in Escherichia coli. Journal of Bacteriology, 195(1), 135-144. https://doi.org/10.1128/JB.01477-12
Lepore, B. W., Indic, M., Pham, H., Hearn, E. M., Patel, D. R., & Van Den Berg, B. (2011). Ligand-gated diffusion across the bacterial outer membrane. Proceedings of the National Academy of Sciences of the United States of America, 108(25), 10121-10126. https://doi.org/10.1073/pnas.1018532108
Li, D. W., Balamurugan, S., Yang, Y. F., Zheng, J. W., Huang, D., Zou, L. G., Yang, W. D., Liu, J. S., Guan, Y., & Li, H. Y. (2019). Transcriptional regulation of microalgae for concurrent lipid overproduction and secretion. Science Advances, 5, eaau3795.
Li, N., Gügel, I. L., Giavalisco, P., Zeisler, V., Schreiber, L., Soll, J., & Philippar, K. (2015). FAX1, a novel membrane protein mediating plastid fatty acid export. PLOS Biology, 13(2), 1-37. https://doi.org/10.1371/journal.pbio.1002053
Li, N., Xu, C., Li-Beisson, Y., & Philippar, K. (2016). Fatty acid and lipid transport in plant cells. Trends in Plant Science, 21(2), 145-158. https://doi.org/10.1016/j.tplants.2015.10.011
Li, N., Zhang, Y., Meng, H., Li, S., Wang, S., Xiao, Z., Chang, P., Zhang, X., Li, Q., Guo, L., Igarashi, Y., & Luo, F. (2019). Characterization of fatty acid exporters involved in fatty acid transport for oil accumulation in the green alga Chlamydomonas reinhardtii. Biotechnology for Biofuels, 12(1), 1-12. https://doi.org/10.1186/s13068-018-1332-4
Li, X., Zhang, R., Patena, W., Gang, S. S., Blum, S. R., Ivanova, N., Yue, R., Robertson, J. M., Lefebvre, P. A., Fitz-Gibbon, S. T., Grossman, A. R., & Jonikas, M. C. (2015). An indexed, mapped mutant library enables reverse genetics studies of biological processes in Chlamydomonas reinhardtii. The Plant Cell, 28(2), 367-387. https://doi.org/10.1105/tpc.15.00465
Liu, B., Xiang, S., Zhao, G., Wang, B., Ma, Y., Liu, W., & Tao, Y. (2019). Efficient production of 3-hydroxypropionate from fatty acids feedstock in Escherichia coli. Metabolic Engineering, 51, 121-130. https://doi.org/10.1016/j.ymben.2018.10.003
Liu, H., Yu, C., Feng, D., Cheng, T., Meng, X., Liu, W., Zou, H., & Xian, M. (2012). Production of extracellular fatty acid using engineered Escherichia coli. Microbial Cell Factories, 11, 1-13. https://doi.org/10.1186/1475-2859-11-41
Liu, N., Liu, B., Wang, G., Soong, Y. H. V., Tao, Y., Liu, W., & Xie, D. (2020). Lycopene production from glucose, fatty acid and waste cooking oil by metabolically engineered Escherichia coli. Biochemical Engineering Journal, 155, 107488. https://doi.org/10.1016/j.bej.2020.107488
Liu, X., Sheng, J., & Curtiss, R. (2011). Fatty acid production in genetically modified cyanobacteria. Proceedings of the National Academy of Sciences of the United States of America, 108(17), 6899-6904. https://doi.org/10.1073/pnas.1103014108
Lovewell, R. R., Sassetti, C. M., & VanderVen, B. C. (2016). Chewing the fat: Lipid metabolism and homeostasis during M. tuberculosis infection. Current Opinion in Microbiology, 29, 30-36. https://doi.org/10.1016/j.mib.2015.10.002
Magnuson, K., Jackowski, S., Rock, C. O., & Cronan, J. E. (1993). Regulation of fatty acid biosynthesis in Escherichia coli. Microbiological Reviews, 57(3), 522-542. https://doi.org/10.1128/mmbr.57.3.522-542.1993
Maloy, S. R., Ginsburgh, C. L., Simons, R. W., & Nunn, W. D. (1981). Transport of long and medium chain fatty acids by Escherichia coli K12. Journal of Biological Chemistry, 256(8), 3735-3742. https://doi.org/10.1016/S0021-9258(19)69516-5
Mangroo, D., & Gerber, G. E. (1993). Fatty acid uptake in Escherichia coli: Regulation by recruitment of fatty acyl-CoA synthetase to the plasma membrane. Biochemistry and Cell Biology, 71(1-2), 51-56. https://doi.org/10.1139/o93-008
Mansy, S. S. (2010). Membrane transport in primitive cells. Cold Spring Harbor Perspectives in Biology, 2, a002188. https://doi.org/10.1002/9780470015902.a0021630
Martin, A., & Daniel, J. (2018). The ABC transporter Rv1272c of Mycobacterium tuberculosis enhances the import of long-chain fatty acids in Escherichia coli. Biochemical and Biophysical Research Communications, 496(2), 667-672. https://doi.org/10.1016/j.bbrc.2018.01.115
Mingardon, F., Clement, C., Hirano, K., Nhan, M., Luning, E. G., Chanal, A., & Mukhopadhyay, A. (2015). Improving olefin tolerance and production in E. coli using native and evolved AcrB. Biotechnology and Bioengineering, 112(5), 879-888. https://doi.org/10.1002/bit.25511
Nakashima, R., Sakurai, K., Yamasaki, S., Nishino, K., & Yamaguchi, A. (2011). Structures of the multidrug exporter AcrB reveal a proximal multisite drug-binding pocket. Nature, 480(7378), 565-569. https://doi.org/10.1038/nature10641
Nazarova, E. V., Montague, C. R., Huang, L., La, T., Russell, D., & Vanderven, B. C. (2019). The genetic requirements of fatty acid import by mycobacterium tuberculosis within macrophages. eLife, 8, 1-12. https://doi.org/10.7554/eLife.43621
Nazarova, E. V., Montague, C. R., La, T., Wilburn, K. M., Sukumar, N., Lee, W., Caldwell, S., Russell, D. G., & VanderVen, B. C. (2017). Rv3723/LucA coordinates fatty acid and cholesterol uptake in Mycobacterium tuberculosis. eLife, 6, 1-22. https://doi.org/10.7554/eLife.26969
Newport, T. D., Sansom, M. S. P., & Stansfeld, P. J. (2019). The MemProtMD database: A resource for membrane-embedded protein structures and their lipid interactions. Nucleic Acids Research, 47, 390-397. https://doi.org/10.1093/nar/gky1047
Nguyen, H. M., Baudet, M., Cuiné, S., Adriano, J. M., Barthe, D., Billon, E., Bruley, C., Beisson, F., Peltier, G., Ferro, M., & Li-Beisson, Y. (2011). Proteomic profiling of oil bodies isolated from the unicellular green microalga Chlamydomonas reinhardtii: With focus on proteins involved in lipid metabolism. Proteomics, 11(21), 4266-4273. https://doi.org/10.1002/pmic.201100114
Nishino, K., & Yamaguchi, A. (2002). EvgA of the two-component signal transduction system modulates production of the YhiUV multidrug transporter in Escherichia coli. Journal of Bacteriology, 184(8), 2319-2323. https://doi.org/10.1128/JB.184.8.2319-2323.2002
Nolan, S. J., Fu, M. S., Coppens, I., & Casadevall, A. (2017). Lipids affect the Cryptococcus neoformans-macrophage interaction and promote nonlytic exocytosis. Infection and Immunity, 85(12), 1-18. https://doi.org/10.1128/IAI.00564-17
Nunn, W. D., & Simons, R. W. (1978). Transport of long-chain fatty acids by Escherichia coli: mapping and characterization of mutants in the fadL gene. Proceedings of the National Academy of Sciences of the United States of America, 75(7), 3377-3381. https://doi.org/10.1073/pnas.75.7.3377
Obermeyer, T., Fraisl, P., DiRusso, C. C., & Black, P. N. (2007). Topology of the yeast fatty acid transport protein Fat1p: Mechanistic implications for functional domains on the cytosolic surface of the plasma membrane. Journal of Lipid Research, 48(11), 2354-2364. https://doi.org/10.1194/jlr.M700300-JLR200
Overath, P., Pauli, G., & Schaire, H. U. (1969). Fatty acid degradation in Escherichia coli: An inducible Acyl-CoA synthetase, the mapping of old-mutations, and the isolation of regulatory mutants. European Journal of Biochemistry, 7, 559-574. https://doi.org/10.1016/0163-7827(92)90004-3
Parsons, J. B., Yao, J., Frank, M. W., Jackson, P., & Rock, C. O. (2012). Membrane disruption by antimicrobial fatty acids releases low-molecular-weight proteins from Staphylococcus aureus. Journal of Bacteriology, 194(19), 5294-5304. https://doi.org/10.1128/JB.00743-12
Scharnewski, M., Pongdontri, P., Mora, G., Hoppert, M., & Fulda, M. (2008). Mutants of Saccharomyces cerevisiae deficient in acyl-CoA synthetases secrete fatty acids due to interrupted fatty acid recycling. FEBS Journal, 275(11), 2765-2778. https://doi.org/10.1111/j.1742-4658.2008.06417.x
Schjerling, C. K., Hummel, R., Hansen, J. K., Børsting, C., Mikkelsen, J. M., Kristiansen, K., & Knudsen, J. (1996). Disruption of the gene encoding the Acyl-CoA-binding Protein (ACB1) perturbs Acyl-CoA Metabolism in Saccharomyces cerevisiae. The Journal of Biological Chemistry, 271(37), 22514-22521.
Shani, N., Sapag, A., Watkins, P. A., & Valle, D. (1996). An S. cerevisiae peroxisomal transporter, orthologous to the human adrenoleukodystrophy protein, appears to be a heterodimer of two half ABC transporters: Pxalp and Pxa2p: Pxalp and Pxa2p. Annals New York Academy of Sciences, 804(1), 770-772.
Shin, J., Yu, J., Park, M., Kim, C., Kim, H., Park, Y., Ban, C., Seydametova, E., Song, Y. H., Shin, C. S., Chung, K. H., Woo, J. M., Chung, H., Park, J. B., & Kweon, D. H. (2019). Endocytosing Escherichia coli as a whole-cell biocatalyst of fatty acids. ACS Synthetic Biology, 8(5), 1055-1066. https://doi.org/10.1021/acssynbio.8b00519
Sushchik, N. N., Kalacheva, G. S., Zhila, N. O., Gladyshev, M. I., & Volova, T. G. (2003). A temperature dependence of the intra- and extracellular fatty-acid composition of green algae and cyanobacterium. Russian Journal of Plant Physiology, 50(3), 374-380.
Takemura, T., Imamura, S., & Tanaka, K. (2019). Identification of a chloroplast fatty acid exporter protein, CmFAX1, and triacylglycerol accumulation by its overexpression in the unicellular red alga Cyanidioschyzon merolae. Algal Research, 38, 101396. https://doi.org/10.1016/j.algal.2018.101396
Tarling, E. J., Vallim, T.Q.dA., & Edwards, P. A. (2013). Role of ABC transporters in lipid transport and human disease. Trends in Endocrinology and Metabolism, 24(7), 342-350. https://doi.org/10.1016/j.tem.2013.01.006
Tejima, K., Ishiai, M., Murayama, S. O., Iwatani, S., & Kajiwara, S. (2018). Candida albicans fatty acyl-CoA synthetase, CaFaa4p, is involved in the uptake of exogenous long-chain fatty acids and cell activity in the biofilm. Current Genetics, 64(2), 429-441. https://doi.org/10.1007/s00294-017-0751-2
Tomitori, H., Kashiwagi, K., Sakata, K., Kakinuma, Y., & Igarashi, K. (1999). Identification of a gene for a polyamine transport protein in yeast. Journal of Biological Chemistry, 274(6), 3265-3267. https://doi.org/10.1074/jbc.274.6.3265
Toscano, W. A., & Hartline, R. A. (1973). Transport of octanoate by Pseudomonas oleovorans. Journal of Bacteriology, 116(2), 541-547. https://doi.org/10.1128/jb.116.2.541-547.1973
Van Den Berg, B. (2005). The FadL family: Unusual transporters for unusual substrates. Current Opinion in Structural Biology, 15(4), 401-407. https://doi.org/10.1016/j.sbi.2005.06.003
Van Den Berg, B., Black, P. N., Clemons, W. M., & Rapoport, T. A. (2004). Crystal structure of the long-chain fatty acid transporter FadL. Science, 304(5676), 1506-1509. https://doi.org/10.1126/science.1097524
Van Roermund, C. W. T., Ijlst, L., Majczak, W., Waterham, H. R., Folkerts, H., Wanders, R. J. A., & Hellingwerf, K. J. (2012). Peroxisomal fatty acid uptake mechanism in Saccharomyces cerevisiae. Journal of Biological Chemistry, 287(24), 20144-20153. https://doi.org/10.1074/jbc.M111.332833
Vasconcelos, B., Teixeira, J. C., Dragone, G., & Teixeira, J. A. (2019). Oleaginous yeasts for sustainable lipid production-From biodiesel to surf boards, a wide range of “green” applications. Applied Microbiology and Biotechnology, 103, 3651-3667. https://doi.org/10.1007/s00253-019-09742-x
Villalba, M. S., & Alvarez, H. M. (2014). Identification of a novel ATP-binding cassette transporter involved in long-chain fatty acid import and its role in triacylglycerol accumulation in Rhodococcus jostii RHA1. Microbiology (United Kingdom), 160(Pt 7), 1523-1532. https://doi.org/10.1099/mic.0.078477-0
Voelker, T. A., & Davies, H. M. (1994). Alteration of the specificity and regulation of fatty acid synthesis of Escherichia coli by expression of a plant medium-chain Acyl-Acyl carrier protein thioesterase. Journal of Bacteriology, 176(23), 7320-7327.
Wang, Z., Fan, G., Hryc, C. F., Blaza, J. N., Serysheva, I. I., Schmid, M. F., & Du, D. (2017). An allosteric transport mechanism for the AcrAB-TolC multidrug efflux pump. eLife, 6, 1-19. https://doi.org/10.7554/eLife.24905
Wu, J. T., Chiang, Y. R., Huang, W. Y., & Jane, W. N. (2006). Cytotoxic effects of free fatty acids on phytoplankton algae and cyanobacteria. Aquatic Toxicology, 80(4), 338-345. https://doi.org/10.1016/j.aquatox.2006.09.011
Wu, J., Wang, Z., Zhang, X., Zhou, P., Xia, X., & Dong, M. (2019). Improving medium chain fatty acid production in Escherichia coli by multiple transporter engineering. Food Chemistry, 272, 628-634. https://doi.org/10.1016/j.foodchem.2018.08.102
Yao, J., & Rock, C. O. (2017). Exogenous fatty acid metabolism in bacteria. Biochimie, 141, 30-39. https://doi.org/10.1016/j.biochi.2017.06.015
Zalatan, F., & Black, P. (2011). Characterization of long-chain fatty acid uptake in Caulobacter crescentus. Archives of Microbiology, 193(7), 479-487. https://doi.org/10.1007/s00203-011-0694-9
Zgurskaya, H. I., & Nikaido, H. (1999). Bypassing the periplasm: Reconstitution of the AcrAB multidrug efflux pump of Escherichia coli. Proceedings of the National Academy of Sciences of the United States of America, 96(13), 7190-7195. https://doi.org/10.1073/pnas.96.13.7190
Zhu, Z., Hu, Y., Teixeira, P. G., Pereira, R., Chen, Y., Siewers, V., & Nielsen, J. (2020). Multidimensional engineering of Saccharomyces cerevisiae for efficient synthesis of medium-chain fatty acids. Nature Catalysis, 3(1), 64-74. https://doi.org/10.1038/s41929-019-0409-1
Zou, Z., Dirusso, C. C., Ctrnacta, V., & Black, P. N. (2002). Fatty acid transport in Saccharomyces cerevisiae: Directed mutagenesis of FAT1 distinguishes the biochemical activities associated with Fat1p. Journal of Biological Chemistry, 277(34), 31062-31071. https://doi.org/10.1074/jbc.M205034200
Zou, Z., Tong, F., Faergeman, N. J., Børsting, C., Black, P. N., & Dirusso, C. C. (2003). Vectorial Acylation in Saccharomyces cerevisiae. The Journal of Biological Chemistry, 278(18), 16414-16422. https://doi.org/10.1074/jbc.M210557200
Zwama, M., Yamasaki, S., Nakashima, R., Sakurai, K., Nishino, K., & Yamaguchi, A. (2018). Multiple entry pathways within the efflux transporter AcrB contribute to multidrug recognition. Nature Communications, 9(1), 124. https://doi.org/10.1038/s41467-017-02493-1

Auteurs

José M Salvador López (JM)

BioPort Group, Faculty of Bioscience Engineering, Centre for Synthetic Biology (CSB), Ghent University, Ghent, Belgium.

Inge N A Van Bogaert (INA)

BioPort Group, Faculty of Bioscience Engineering, Centre for Synthetic Biology (CSB), Ghent University, Ghent, Belgium.

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