Variants in FLRT3 and SLC35E2B identified using exome sequencing in seven high myopia families from Central Europe.


Journal

Advances in medical sciences
ISSN: 1898-4002
Titre abrégé: Adv Med Sci
Pays: Netherlands
ID NLM: 101276222

Informations de publication

Date de publication:
Mar 2021
Historique:
received: 14 07 2020
revised: 09 02 2021
accepted: 26 02 2021
pubmed: 13 3 2021
medline: 30 11 2021
entrez: 12 3 2021
Statut: ppublish

Résumé

High myopia (HM) is an eye disorder with both environmental and genetic factors involved. Many genetic factors responsible for HM were recognized worldwide, but little is known about genetic variants underlying HM in Central Europe. Thus, the aim of this study was to identify rare sequence variants involved in HM in families from Central Europe to better understand the genetic basis of HM. We assessed 17 individuals from 7 unrelated Central European families with hereditary HM using exome sequencing (ES). Segregation of selected variants in other available family members was performed using Sanger sequencing. Detected 73 rare variants were selected for verification. We observed 2 missense variants, c.938C>T in SLC35E2B - encoding solute carrier family 35 member E2B, and c.1642G>C in FLRT3 - encoding fibronectin leucine rich transmembrane protein, segregating with HM in one family. FLRT3 ​and/or ​SLC35E2B ​could represent disease candidate genes and identified sequence variants might be responsible for HM in the studied family.

Identifiants

pubmed: 33711669
pii: S1896-1126(21)00013-4
doi: 10.1016/j.advms.2021.02.005
pii:
doi:

Substances chimiques

FLRT3 protein, human 0
Membrane Glycoproteins 0
Solute Carrier Proteins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

192-198

Informations de copyright

Copyright © 2021 Medical University of Bialystok. Published by Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare no conflict of interests.

Auteurs

Joanna Swierkowska (J)

Institute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.

Justyna A Karolak (JA)

Chair and Department of Genetics and Pharmaceutical Microbiology, Poznan University of Medical Sciences, Poznan, Poland; Institute of Human Genetics, Polish Academy of Sciences, Poznan, Poland.

Tomasz Gambin (T)

Institute of Computer Science, Warsaw University of Technology, Warsaw, Poland; Department of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA.

Malgorzata Rydzanicz (M)

Department of Medical Genetics, Medical University of Warsaw, Warsaw, Poland.

Agata Frajdenberg (A)

Department of Ophthalmology, Linköping University, Linköping, Sweden; Department of Ophthalmology, Namsos Hospital, Namsos, Norway.

Malgorzata Mrugacz (M)

Department of Ophthalmology and Eye Rehabilitation, Medical University of Bialystok, Bialystok, Poland.

Monika Podfigurna-Musielak (M)

Medical Centre Vigor Med, Leszno, Poland.

Pawel Stankiewicz (P)

Department of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA.

James R Lupski (JR)

Department of Molecular & Human Genetics, Baylor College of Medicine, Houston, TX, USA; Human Genome Sequencing Center, Baylor College of Medicine, Houston, TX, USA; Department of Pediatrics, Baylor College of Medicine, Houston, TX, USA; Texas Children's Hospital, Houston, TX, USA.

Marzena Gajecka (M)

Institute of Human Genetics, Polish Academy of Sciences, Poznan, Poland; Chair and Department of Genetics and Pharmaceutical Microbiology, Poznan University of Medical Sciences, Poznan, Poland. Electronic address: gamar@man.poznan.pl.

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Classifications MeSH