Emergence of Burkholderia pseudomallei Sequence Type 562, Northern Australia.
Australia
Burkholderia pseudomallei
ST562
bacteria
epidemiology
genomics
melioidosis
phylogenetics
sequence type
Journal
Emerging infectious diseases
ISSN: 1080-6059
Titre abrégé: Emerg Infect Dis
Pays: United States
ID NLM: 9508155
Informations de publication
Date de publication:
2021
2021
Historique:
entrez:
23
3
2021
pubmed:
24
3
2021
medline:
6
7
2021
Statut:
ppublish
Résumé
Since 2005, the range of Burkholderia pseudomallei sequence type 562 (ST562) has expanded in northern Australia. During 2005-2019, ST562 caused melioidosis in 61 humans and 3 animals. Cases initially occurred in suburbs surrounding a creek before spreading across urban Darwin, Australia and a nearby island community. In urban Darwin, ST562 caused 12% (53/440) of melioidosis cases, a proportion that increased during the study period. We analyzed 2 clusters of cases with epidemiologic links and used genomic analysis to identify previously unassociated cases. We found that ST562 isolates from Hainan Province, China, and Pingtung County, Taiwan, were distantly related to ST562 strains from Australia. Temporal genomic analysis suggested a single ST562 introduction into the Darwin region in ≈1988. The origin and transmission mode of ST562 into Australia remain uncertain.
Identifiants
pubmed: 33754984
doi: 10.3201/eid2704.202716
pmc: PMC8007296
doi:
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
1057-1067Références
mSphere. 2016 Mar 09;1(2):
pubmed: 27303718
Curr Trop Med Rep. 2017;4(4):185-191
pubmed: 29188170
J Infect. 2016 Jun;72(6):687-697
pubmed: 26945846
BMC Biol. 2009 Nov 18;7:78
pubmed: 19922616
J Clin Microbiol. 2014 Feb;52(2):650-3
pubmed: 24478504
Med J Aust. 1992 Sep 7;157(5):332-4
pubmed: 1279367
PLoS Negl Trop Dis. 2014 May 29;8(5):e2877
pubmed: 24874950
Microb Genom. 2017 Nov;3(11):
pubmed: 29208140
PLoS Pathog. 2020 Mar 5;16(3):e1008298
pubmed: 32134991
Emerg Infect Dis. 2015 Nov;21(11):2052-4
pubmed: 26488732
Nucleic Acids Res. 2015 Feb 18;43(3):e15
pubmed: 25414349
Nat Microbiol. 2017 Jan 23;2:16263
pubmed: 28112723
Epidemiol Infect. 2016 Jul;144(9):1924-32
pubmed: 26935879
PLoS Negl Trop Dis. 2019 Sep 5;13(9):e0007727
pubmed: 31487287
PLoS Negl Trop Dis. 2010 Nov 30;4(11):e900
pubmed: 21152057
Proc Natl Acad Sci U S A. 2004 Sep 28;101(39):14240-5
pubmed: 15377794
Appl Environ Microbiol. 2006 Nov;72(11):6865-75
pubmed: 16980433
J Clin Microbiol. 2001 Oct;39(10):3801-2
pubmed: 11574624
Med J Aust. 2012 Mar 19;196(5):345-8
pubmed: 22432675
mBio. 2017 Apr 11;8(2):
pubmed: 28400528
Am J Trop Med Hyg. 2016 Jan;94(1):68-72
pubmed: 26526925
Sci Rep. 2018 Jun 6;8(1):8674
pubmed: 29875361
Appl Environ Microbiol. 2015 Nov 25;82(3):954-63
pubmed: 26607593
Genome Announc. 2015 Oct 15;3(5):
pubmed: 26472827
J Clin Microbiol. 2014 Sep;52(9):3418-21
pubmed: 24966357
BMC Vet Res. 2019 Dec 19;15(1):458
pubmed: 31856823
J Clin Microbiol. 2003 May;41(5):2068-79
pubmed: 12734250
PLoS Comput Biol. 2014 Apr 10;10(4):e1003537
pubmed: 24722319
Emerg Infect Dis. 2011 Jul;17(7):1310-2
pubmed: 21762599
Appl Environ Microbiol. 2014 Jun;80(11):3463-8
pubmed: 24657869
J Clin Microbiol. 2015 Jan;53(1):323-6
pubmed: 25392354
Genome Announc. 2014 Nov 20;2(6):
pubmed: 25414490
N Engl J Med. 2012 Sep 13;367(11):1035-44
pubmed: 22970946
Vet Rec. 1992 Jun 13;130(24):525-9
pubmed: 1279882
PLoS Negl Trop Dis. 2009;3(1):e364
pubmed: 19156200
Sci Rep. 2020 Mar 25;10(1):5443
pubmed: 32214186
Bull Soc Pathol Exot Filiales. 1982 Aug-Oct;75(4):375-83
pubmed: 7172358
Mol Biol Evol. 2015 Jan;32(1):268-74
pubmed: 25371430
J Clin Microbiol. 2015 Apr;53(4):1144-8
pubmed: 25631791
Microb Genom. 2016 Jul 11;2(7):e000067
pubmed: 28348862
Microb Genom. 2017 Jun 13;3(8):e000117
pubmed: 29026657
Nat Microbiol. 2016 Jan 11;1:15008
pubmed: 27571754
Microb Genom. 2019 Aug;5(8):
pubmed: 31433287
PLoS Negl Trop Dis. 2015 Jun 10;9(6):e0003834
pubmed: 26061639
Photochem Photobiol. 2009 Jul-Aug;85(4):978-86
pubmed: 19192198
Environ Sci Pollut Res Int. 2016 Apr;23(8):7828-39
pubmed: 26758304
Semin Respir Crit Care Med. 2015 Feb;36(1):111-25
pubmed: 25643275