Pseudomonas anatoliensis sp. nov and Pseudomonas iridis sp. nov. isolated from fish.
Aquaculture
Oncorhynchus mykiss
Pseudomonas
Rainbow trout
Journal
Systematic and applied microbiology
ISSN: 1618-0984
Titre abrégé: Syst Appl Microbiol
Pays: Germany
ID NLM: 8306133
Informations de publication
Date de publication:
May 2021
May 2021
Historique:
received:
29
09
2020
revised:
05
03
2021
accepted:
09
03
2021
pubmed:
11
4
2021
medline:
14
10
2021
entrez:
10
4
2021
Statut:
ppublish
Résumé
In a study carried out between 2013 and 2018 in fish farms in Turkey, several putative novel species were isolated. The 16S rRNA nucleotide sequences of fourteen strains of Gram-negative rods, which were isolated from asymptomatic and symptomatic rainbow trouts (Onchorhynchus mykiss), placed them under the genus Pseudomonas. The similarity values of the concatenated nucleotide sequences of the rpoD, rpoB, gyrB and 16S rRNA genes clustered these isolates into the P. fluorescens phylogenetic group of species and into the Pseudomonas koreensis subgroup, close to Pseudomonas helmanticensis and Pseudomonas baetica. An isolate of a totally different origin, strain CCUG 67011, clustered with these isolates. Phenotypic characterization, together with the chemotaxonomic data, whole-cell MALDI-TOF MS and fatty acids methyl esters analyses were performed. The DNA G + C content was 58.7 mol% for isolate P9
Identifiants
pubmed: 33838437
pii: S0723-2020(21)00021-7
doi: 10.1016/j.syapm.2021.126198
pii:
doi:
Substances chimiques
DNA, Bacterial
0
RNA, Ribosomal, 16S
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
126198Commentaires et corrections
Type : ErratumIn
Informations de copyright
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