ChIP-sequencing analysis of E2F transcription factor 2 reveals its role in various biological processes of rheumatoid arthritis synovial fibroblasts.
Arthritis, Rheumatoid
/ genetics
Chromatin Immunoprecipitation Sequencing
Disease Progression
E2F2 Transcription Factor
/ metabolism
Female
Fibroblasts
/ immunology
Gene Regulatory Networks
/ immunology
Humans
Middle Aged
Primary Cell Culture
Protein Interaction Mapping
Protein Interaction Maps
/ genetics
Signal Transduction
/ genetics
Synovial Membrane
/ cytology
ChIP-seq
E2F2
metabolism
stress response
synthesis of ribosomes
Journal
Bioscience trends
ISSN: 1881-7823
Titre abrégé: Biosci Trends
Pays: Japan
ID NLM: 101502754
Informations de publication
Date de publication:
11 May 2021
11 May 2021
Historique:
pubmed:
7
5
2021
medline:
30
11
2021
entrez:
6
5
2021
Statut:
ppublish
Résumé
The development and progression of rheumatoid arthritis (RA) are complex and the pathogenesis of this disease is not fully understood. E2F transcription factor 2 (E2F2) affects the development and progression of many diseases. To identify the mechanisms underlying the role of E2F2 in RA, chromatin immunoprecipitation was performed followed by sequencing (ChIP-seq) using the E2F2 antibody. Gene Ontology (GO) analysis of differentially expressed genes (DEGs) and Kyoto Encyclopedia of Genes and Genomes (KEGG) pathway enrichment of captured downstream target genes and Metascape analysis of 22 protein molecules partly elucidated the mechanism by which E2F2 affects the progression of RA. Results indicated that E2F2 affects the metabolism of RASFs and the development of ribosome synthesis as well as the stress response. Results indicated that E2F2 can affect multiple biological processes involving RASFs and indicate a unique possibility of targeting E2F2 in the treatment of RA.
Identifiants
pubmed: 33952803
doi: 10.5582/bst.2021.01046
doi:
Substances chimiques
E2F2 Transcription Factor
0
E2F2 protein, human
0
Types de publication
Letter
Langues
eng
Sous-ensembles de citation
IM