Physical Characterization of Triolein and Implications for Its Role in Lipid Droplet Biogenesis.
Journal
The journal of physical chemistry. B
ISSN: 1520-5207
Titre abrégé: J Phys Chem B
Pays: United States
ID NLM: 101157530
Informations de publication
Date de publication:
01 07 2021
01 07 2021
Historique:
pubmed:
19
6
2021
medline:
5
8
2021
entrez:
18
6
2021
Statut:
ppublish
Résumé
Lipid droplets (LDs) are neutral lipid-storing organelles surrounded by a phospholipid (PL) monolayer. At present, how LDs are formed in the endoplasmic reticulum (ER) bilayer is poorly understood. In this study, we present a revised all-atom (AA) triolein (TG) model, the main constituent of the LD core, and characterize its properties in a bilayer membrane to demonstrate the implications of its behavior in LD biogenesis. In bilayer simulations, TG resides at the surface, adopting PL-like conformations (denoted in this work as SURF-TG). Free energy sampling simulation results estimate the barrier for TG relocating from the bilayer surface to the bilayer center to be ∼2 kcal/mol in the absence of an oil lens. SURF-TG is able to modulate membrane properties by increasing PL ordering, decreasing bending modulus, and creating local negative curvature. The other neutral lipid, dioleoyl-glycerol (DAG), also reduces the membrane bending modulus and populates negative curvature regions. A phenomenological coarse-grained (CG) model is also developed to observe larger-scale SURF-TG-mediated membrane deformation. CG simulations confirm that TG nucleates between the bilayer leaflets at a critical concentration when SURF-TG is evenly distributed. However, when one monolayer contains more SURF-TG, the membrane bends toward the other leaflet, followed by TG nucleation if a concentration is higher than the critical threshold. The central conclusion of this study is that SURF-TG is a negative curvature inducer, as well as a membrane modulator. To this end, a model is proposed in which the accumulation of SURF-TG in the luminal leaflet bends the ER bilayer toward the cytosolic side, followed by TG nucleation.
Identifiants
pubmed: 34139844
doi: 10.1021/acs.jpcb.1c03559
pmc: PMC8314861
mid: NIHMS1726401
doi:
Substances chimiques
Lipid Bilayers
0
Phospholipids
0
Triolein
122-32-7
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
6874-6888Subventions
Organisme : NIGMS NIH HHS
ID : R01 GM063796
Pays : United States
Références
Biophys J. 2008 Jan 1;94(1):117-24
pubmed: 17827241
Curr Biol. 2020 Jul 6;30(13):2481-2494.e6
pubmed: 32442467
Biophys J. 2017 Apr 11;112(7):1417-1430
pubmed: 28402884
Chem Rev. 2019 May 8;119(9):5607-5774
pubmed: 30859819
Biochim Biophys Acta Biomembr. 2017 Feb;1859(2):135-145
pubmed: 27814978
J Comput Chem. 2005 Dec;26(16):1701-18
pubmed: 16211538
Dev Cell. 2019 Dec 2;51(5):551-563.e7
pubmed: 31708432
Biochemistry. 2001 Sep 4;40(35):10522-31
pubmed: 11523994
J Phys Chem B. 2015 Dec 10;119(49):15263-74
pubmed: 26560961
Dev Cell. 2019 Jul 1;50(1):25-42.e7
pubmed: 31155466
Nat Rev Mol Cell Biol. 2013 Dec;14(12):775-86
pubmed: 24220094
J Comput Chem. 2011 Jul 30;32(10):2319-27
pubmed: 21500218
Cell. 2009 Nov 25;139(5):855-60
pubmed: 19945371
J Chem Theory Comput. 2016 Oct 11;12(10):5157-5169
pubmed: 27598403
Biophys J. 1994 Oct;67(4):1603-11
pubmed: 7819492
PLoS Biol. 2021 Jan 22;19(1):e3000998
pubmed: 33481779
J Phys Chem B. 2005 Feb 24;109(7):2469-73
pubmed: 16851243
Biophys J. 2019 Aug 6;117(3):553-562
pubmed: 31349990
J Phys Chem B. 2009 Apr 2;113(13):4443-55
pubmed: 19267467
Curr Opin Cell Biol. 2016 Aug;41:25-32
pubmed: 27062546
Chem Rev. 2019 May 8;119(9):5954-5997
pubmed: 30747524
J Chem Phys. 2008 Jun 28;128(24):244115
pubmed: 18601325
Science. 2014 Aug 8;345(6197):693-7
pubmed: 25104391
Science. 2020 Nov 27;370(6520):
pubmed: 33243857
Biochemistry. 1992 Mar 24;31(11):2856-64
pubmed: 1550812
Biophys J. 2013 Feb 5;104(3):575-84
pubmed: 23442908
Nature. 2020 May;581(7808):323-328
pubmed: 32433611
Elife. 2021 Feb 01;10:
pubmed: 33522484
Biochemistry. 1996 Jul 30;35(30):9917-24
pubmed: 8703966
J Chem Theory Comput. 2019 Jun 11;15(6):3854-3867
pubmed: 31002505
Phys Rev A Gen Phys. 1985 Mar;31(3):1695-1697
pubmed: 9895674
J Chem Theory Comput. 2016 Jan 12;12(1):405-13
pubmed: 26631602
Elife. 2015 Apr 21;4:
pubmed: 25898003
J Comput Chem. 2009 Oct;30(13):2157-64
pubmed: 19229944
Dev Cell. 2018 Jan 08;44(1):73-86.e4
pubmed: 29316443
Biochim Biophys Acta. 2016 Aug;1861(8 Pt B):847-861
pubmed: 26747646
J Phys Chem B. 2014 Sep 4;118(35):10335-40
pubmed: 25133683
J Chem Phys. 2008 Oct 14;129(14):144108
pubmed: 19045135
Chem Phys Lipids. 2015 Nov;192:60-74
pubmed: 26238099
J Phys Chem B. 2010 Mar 11;114(9):3276-84
pubmed: 20151713
Prog Lipid Res. 2015 Jul;59:147-71
pubmed: 26165797
Nat Rev Mol Cell Biol. 2019 Mar;20(3):137-155
pubmed: 30523332
J Am Chem Soc. 2014 Jan 15;136(2):725-32
pubmed: 24345334
J Chem Theory Comput. 2021 Mar 9;17(3):1562-1580
pubmed: 33620214
Biophys J. 1997 Jul;73(1):267-76
pubmed: 9199791
Elife. 2015 Mar 25;4:
pubmed: 25806685
J Phys Chem B. 2014 Sep 25;118(38):11145-51
pubmed: 25188363
Annu Rev Cell Dev Biol. 2017 Oct 6;33:491-510
pubmed: 28793795
J Mol Biol. 2020 Aug 21;432(18):5023-5042
pubmed: 32234309
J Chem Theory Comput. 2014 Dec 9;10(12):5265-75
pubmed: 26583210
Nat Rev Mol Cell Biol. 2018 May;19(5):281-296
pubmed: 29410529
Dev Cell. 2020 Aug 24;54(4):471-487.e7
pubmed: 32730754
Biophys J. 2021 Feb 16;120(4):607-617
pubmed: 33460598
Elife. 2016 Aug 26;5:
pubmed: 27564575
Biochemistry. 1975 Jun 3;14(11):2283-7
pubmed: 1173551
J Chem Theory Comput. 2020 Nov 10;16(11):6823-6842
pubmed: 32975948
J Comput Chem. 2008 Aug;29(11):1859-65
pubmed: 18351591
J Chem Theory Comput. 2021 Mar 9;17(3):1581-1595
pubmed: 33620194
PLoS One. 2010 Sep 22;5(9):e12811
pubmed: 20877640
Proc Natl Acad Sci U S A. 2019 Dec 17;116(51):25649-25658
pubmed: 31757855
Curr Opin Cell Biol. 2014 Aug;29:39-45
pubmed: 24736091
J Chem Theory Comput. 2008 Jan;4(1):116-22
pubmed: 26619985
J Chem Theory Comput. 2018 Feb 13;14(2):948-958
pubmed: 29268012
Biophys J. 2009 Jul 8;97(1):50-8
pubmed: 19580743
Chem Rev. 2019 May 8;119(9):5775-5848
pubmed: 30758191
Annu Rev Biochem. 2012;81:687-714
pubmed: 22524315
Biophys J. 2013 May 21;104(10):2202-11
pubmed: 23708360
Curr Opin Struct Biol. 2012 Apr;22(2):175-86
pubmed: 22402497
Biophys J. 2008 Sep;95(5):2356-67
pubmed: 18502796
Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):11226-11231
pubmed: 27655892
J Chem Theory Comput. 2013 Jan 8;9(1):750-765
pubmed: 25100925
Biophys J. 2000 Jul;79(1):328-39
pubmed: 10866959
Biophys J. 2013 Feb 5;104(3):585-93
pubmed: 23442909
Biophys J. 1994 Jun;66(6):2127-38
pubmed: 8075346
J Chem Theory Comput. 2018 Dec 11;14(12):6159-6174
pubmed: 30354110
J Chem Theory Comput. 2017 Mar 14;13(3):1010-1022
pubmed: 28112956
Biophys J. 2011 May 4;100(9):2104-11
pubmed: 21539777
J Chem Theory Comput. 2006 May;2(3):637-48
pubmed: 26626671
Nature. 2020 May;581(7808):329-332
pubmed: 32433610
Biophys J. 2018 Feb 6;114(3):631-640
pubmed: 29414709
J Chem Phys. 2004 Jan 8;120(2):1059-71
pubmed: 15267943
J Chem Theory Comput. 2018 Apr 10;14(4):2180-2197
pubmed: 29481754
Chem Rev. 2019 May 8;119(9):6184-6226
pubmed: 30623647
Faraday Discuss. 2013;161:591-611
pubmed: 23805759
Proc Natl Acad Sci U S A. 2018 Sep 11;115(37):E8595-E8603
pubmed: 30150411
Biophys J. 2020 Nov 17;119(10):1958-1969
pubmed: 33120015
J Phys Chem B. 2010 Jun 17;114(23):7830-43
pubmed: 20496934
Proc Natl Acad Sci U S A. 1981 Nov;78(11):6878-82
pubmed: 6947263
Proc Natl Acad Sci U S A. 2021 Mar 9;118(10):
pubmed: 33674387
J Chem Theory Comput. 2013 May 14;9(5):2466-80
pubmed: 26583735
J Chem Phys. 2008 Jun 28;128(24):244114
pubmed: 18601324
Phys Rev E Stat Nonlin Soft Matter Phys. 2005 Jul;72(1 Pt 1):011915
pubmed: 16090009
J Chem Phys. 2007 Jan 7;126(1):014101
pubmed: 17212484
J Chem Theory Comput. 2014 Sep 9;10(9):3626-33
pubmed: 26588507
J Comput Chem. 2014 Oct 15;35(27):1997-2004
pubmed: 25130509
J Phys Chem B. 2021 Jun 3;125(21):5572-5586
pubmed: 34014091
Biophys J. 2013 Aug 6;105(3):711-9
pubmed: 23931319
Biochim Biophys Acta. 1974 Oct 29;367(2):165-76
pubmed: 4371833
Proc Natl Acad Sci U S A. 2013 Dec 17;110(51):20396-401
pubmed: 24284177
Endocrinology. 2008 Mar;149(3):942-9
pubmed: 18202123
J Chem Theory Comput. 2019 Mar 12;15(3):2087-2100
pubmed: 30702887