Deep-sea plastisphere: Long-term colonization by plastic-associated bacterial and archaeal communities in the Southwest Atlantic Ocean.

16S rRNA Core microbiome Microbial colonization Plastics

Journal

The Science of the total environment
ISSN: 1879-1026
Titre abrégé: Sci Total Environ
Pays: Netherlands
ID NLM: 0330500

Informations de publication

Date de publication:
01 Nov 2021
Historique:
received: 14 01 2021
revised: 20 05 2021
accepted: 04 06 2021
pubmed: 27 6 2021
medline: 7 9 2021
entrez: 26 6 2021
Statut: ppublish

Résumé

Marine plastic pollution is a global concern because of continuous release into the oceans over the last several decades. Although recent studies have made efforts to characterize the so-called plastisphere, or microbial community inhabiting plastic substrates, it is not clear whether the plastisphere is defined as a core community or as a random attachment of microbial cells. Likewise, little is known about the influence of the deep-sea environment on the plastisphere. In our experimental study, we evaluated the microbial colonization on polypropylene pellets and two types of plastic bags: regular high density polyethylene (HDPE) and HDPE with the oxo-biodegradable additive BDA. Gravel was used as control. Samples were deployed at three sites at 3300 m depth in the Southwest Atlantic Ocean and left for microbial colonization for 719 days. For microbial communities analysis, DNA was extracted from the biofilm on plastic and gravel substrates, and then the 16S rRNA was sequenced through the Illumina Miseq platform. Cultivation was performed to isolate strains from the plastic and gravel substrates. Substrate type strongly influenced the microbial composition and structure, while no difference between sites was detected. Although several taxa were shared among plastics, we observed some groups specific for each plastic substrate. These communities comprised taxa previously reported from both epipelagic zones and deep-sea benthic ecosystems. The core microbiome (microbial taxa shared by all plastic substrates) was exclusively composed by low abundance taxa, with some members well-described in the plastisphere and with known plastic-degradation capabilities. Additionally, we obtained bacterial strains that have been previously reported inhabiting plastic substrates and/or degrading hydrocarbon compounds, which corroborates our metabarcoding data and suggests the presence of microbial members potentially active and involved with degradation of these plastics in the deep sea.

Identifiants

pubmed: 34174607
pii: S0048-9697(21)03406-9
doi: 10.1016/j.scitotenv.2021.148335
pii:
doi:

Substances chimiques

Plastics 0
RNA, Ribosomal, 16S 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

148335

Informations de copyright

Copyright © 2021 Elsevier B.V. All rights reserved.

Déclaration de conflit d'intérêts

Declaration of competing interest The authors declare that they have no known competing financial interests or personal relationships that could have appeared to influence the work reported in this paper.

Auteurs

Luana Agostini (L)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Julio Cezar Fornazier Moreira (JCF)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil. Electronic address: jfornazier@usp.br.

Amanda Gonçalves Bendia (AG)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Maria Carolina Pezzo Kmit (MCP)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Linda Gwen Waters (LG)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Marina Ferreira Mourão Santana (MFM)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Paulo Yukio Gomes Sumida (PYG)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Alexander Turra (A)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Vivian Helena Pellizari (VH)

Instituto Oceanográfico, Universidade de São Paulo, Praça do Oceanográfico, 191, São Paulo CEP: 05508-120, Brazil.

Articles similaires

Populus Soil Microbiology Soil Microbiota Fungi
Coal Metagenome Phylogeny Bacteria Genome, Bacterial
Lakes Salinity Archaea Bacteria Microbiota
Rhizosphere Glycine max Seeds Soybean Oil Soil Microbiology

Classifications MeSH