Whole-Exome Sequencing in Critically Ill Neonates and Infants: Diagnostic Yield and Predictability of Monogenic Diagnosis.

Diagnostic workflow Genetic diagnostics Neonatal intensive care Preterm infant Whole-exome sequencing

Journal

Neonatology
ISSN: 1661-7819
Titre abrégé: Neonatology
Pays: Switzerland
ID NLM: 101286577

Informations de publication

Date de publication:
2021
Historique:
received: 16 01 2021
accepted: 27 04 2021
pubmed: 9 7 2021
medline: 7 9 2021
entrez: 8 7 2021
Statut: ppublish

Résumé

Monogenic diseases play an important role in critically ill neonates and infants treated in the intensive care unit. This study aimed to determine the diagnostic yield of whole-exome sequencing (WES) for monogenic diseases and identify phenotypes more likely associated with a genetic etiology. From March 2017 to 2020, a comprehensive diagnostic workup including WES in a single academic center was performed in 61 unrelated, critically ill neonates and infants with an unknown underlying disease within the first year of life. We conducted 59 trio-WES, 1 duo-WES, and 1 single-WES analyses. Symptoms were classified according to the Human Phenotype Ontology. The overall molecular genetic diagnostic rate within our cohort was 46% (28/61) and 50% (15/30) in the subgroup of preterm neonates. Identifying the genetic cause of disease facilitates individualized management in the majority of patients. A positive or negative predictive power of specific clinical features for a genetic diagnosis could not be observed. WES is a powerful noninvasive diagnostic tool in critically ill neonates and infants with a high diagnostic rate. We recommend initiating WES as early as possible due to the impact on management and family counseling. Recommendations regarding the clinical utility of WES in critically ill neonates and infants should not be based on the phenotype alone. Here, we present a clinical workflow for the application of WES for critically ill neonates and infants in an interdisciplinary setting.

Identifiants

pubmed: 34237744
pii: 000516890
doi: 10.1159/000516890
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

454-461

Informations de copyright

© 2021 S. Karger AG, Basel.

Auteurs

Tasja Scholz (T)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Martin Ernst Blohm (ME)

Division of Neonatology and Pediatric Intensive Care, Department of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Fanny Kortüm (F)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Tatjana Bierhals (T)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Davor Lessel (D)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Amelie T van der Ven (AT)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Jasmin Lisfeld (J)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Theresia Herget (T)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Katja Kloth (K)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Dominique Singer (D)

Division of Neonatology and Pediatric Intensive Care, Department of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Anna Perez (A)

Division of Neonatology and Pediatric Intensive Care, Department of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Nadia Obi (N)

Department of Medical Biometrics/Epidemiology, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Jessika Johannsen (J)

Department of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Jonas Denecke (J)

Department of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

René Santer (R)

Department of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Christian Kubisch (C)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Philipp Deindl (P)

Division of Neonatology and Pediatric Intensive Care, Department of Pediatrics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

Maja Hempel (M)

Institute of Human Genetics, University Medical Center Hamburg-Eppendorf, Hamburg, Germany.

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