Reconstructing the evolutionary history of the oxytocin and vasotocin receptor gene family: Insights on whole genome duplication scenarios.
Animals
Biological Evolution
Databases, Genetic
Evolution, Molecular
Gene Duplication
/ genetics
Gene Expression
/ genetics
Gene Expression Regulation
/ genetics
Genome
/ genetics
Humans
Oxytocin
/ genetics
Phylogeny
Receptors, Oxytocin
/ genetics
Receptors, Vasopressin
/ genetics
Vasotocin
/ genetics
Genome evolution
Oxytocin
Vasopressin
Vasotocin
Vertebrate evolution
Whole genome duplication
Journal
Developmental biology
ISSN: 1095-564X
Titre abrégé: Dev Biol
Pays: United States
ID NLM: 0372762
Informations de publication
Date de publication:
11 2021
11 2021
Historique:
received:
05
02
2021
revised:
08
06
2021
accepted:
22
07
2021
pubmed:
31
7
2021
medline:
18
11
2021
entrez:
30
7
2021
Statut:
ppublish
Résumé
Vertebrate genome evolution remains a hotly debated topic, specifically as regards the number and the timing of putative rounds of whole genome duplication events. In this study, I sought to shed light to this conundrum through assessing the evolutionary history of the oxytocin/vasotocin receptor family. I performed ancestral analyses of the genomic segments containing oxytocin and vasotocin receptors (OTR-VTRs) by mapping them back to the reconstructed ancestral vertebrate/chordate karyotypes reported in five independent studies (Nakatani et al., 2007; Putnam et al., 2008; Smith and Keinath, 2015; Smith et al., 2018; Simakov et al., 2020) and found that two alternative scenarios can account for their evolution: one consistent with one round of whole genome duplication in the common ancestor of lampreys and gnathostomes, followed by segmental duplications in both lineages, and another consistent with two rounds of whole genome duplication, with the first occurring in the gnathostome-lamprey ancestor and the second in the jawed vertebrate ancestor. Combining the data reported here with synteny and phylogeny data reported in our previous study (Theofanopoulou et al., 2021), I put forward that a single round of whole genome duplication scenario is more consistent with the synteny and evolution of chromosomes where OTR-VTRs are encountered, without excluding the possibility of a scenario including two rounds of whole genome duplication. Although the analysis of one gene family is not able to capture the full complexity of vertebrate genome evolution, this study can provide solid insight, since the gene family used here has been meticulously analyzed for its genes' orthologous and paralogous relationships across species using high quality genomes.
Identifiants
pubmed: 34329619
pii: S0012-1606(21)00175-5
doi: 10.1016/j.ydbio.2021.07.012
pii:
doi:
Substances chimiques
Receptors, Oxytocin
0
Receptors, Vasopressin
0
vasotocin receptor
0
Oxytocin
50-56-6
Vasotocin
W6S6URY8OF
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
99-106Informations de copyright
Copyright © 2021 The Author. Published by Elsevier Inc. All rights reserved.