Reconstructing the evolutionary history of the oxytocin and vasotocin receptor gene family: Insights on whole genome duplication scenarios.


Journal

Developmental biology
ISSN: 1095-564X
Titre abrégé: Dev Biol
Pays: United States
ID NLM: 0372762

Informations de publication

Date de publication:
11 2021
Historique:
received: 05 02 2021
revised: 08 06 2021
accepted: 22 07 2021
pubmed: 31 7 2021
medline: 18 11 2021
entrez: 30 7 2021
Statut: ppublish

Résumé

Vertebrate genome evolution remains a hotly debated topic, specifically as regards the number and the timing of putative rounds of whole genome duplication events. In this study, I sought to shed light to this conundrum through assessing the evolutionary history of the oxytocin/vasotocin receptor family. I performed ancestral analyses of the genomic segments containing oxytocin and vasotocin receptors (OTR-VTRs) by mapping them back to the reconstructed ancestral vertebrate/chordate karyotypes reported in five independent studies (Nakatani et al., 2007; Putnam et al., 2008; Smith and Keinath, 2015; Smith et al., 2018; Simakov et al., 2020) and found that two alternative scenarios can account for their evolution: one consistent with one round of whole genome duplication in the common ancestor of lampreys and gnathostomes, followed by segmental duplications in both lineages, and another consistent with two rounds of whole genome duplication, with the first occurring in the gnathostome-lamprey ancestor and the second in the jawed vertebrate ancestor. Combining the data reported here with synteny and phylogeny data reported in our previous study (Theofanopoulou et al., 2021), I put forward that a single round of whole genome duplication scenario is more consistent with the synteny and evolution of chromosomes where OTR-VTRs are encountered, without excluding the possibility of a scenario including two rounds of whole genome duplication. Although the analysis of one gene family is not able to capture the full complexity of vertebrate genome evolution, this study can provide solid insight, since the gene family used here has been meticulously analyzed for its genes' orthologous and paralogous relationships across species using high quality genomes.

Identifiants

pubmed: 34329619
pii: S0012-1606(21)00175-5
doi: 10.1016/j.ydbio.2021.07.012
pii:
doi:

Substances chimiques

Receptors, Oxytocin 0
Receptors, Vasopressin 0
vasotocin receptor 0
Oxytocin 50-56-6
Vasotocin W6S6URY8OF

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

99-106

Informations de copyright

Copyright © 2021 The Author. Published by Elsevier Inc. All rights reserved.

Auteurs

Constantina Theofanopoulou (C)

Rockefeller University, New York, USA. Electronic address: ktheofanop@rockefeller.edu.

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Classifications MeSH