Molecular Detection of Ralstonia solanacearum to Facilitate Breeding for Resistance to Bacterial Wilt in Potato.

Bacterial wilt Disease resistance Plant breeding Potato brown rot Ralstonia solanacearum Solanum tuberosum

Journal

Methods in molecular biology (Clifton, N.J.)
ISSN: 1940-6029
Titre abrégé: Methods Mol Biol
Pays: United States
ID NLM: 9214969

Informations de publication

Date de publication:
2021
Historique:
entrez: 27 8 2021
pubmed: 28 8 2021
medline: 12 1 2022
Statut: ppublish

Résumé

Potato bacterial wilt is caused by the devastating bacterial pathogen Ralstonia solanacearum. Quantitative resistance to this disease has been and is currently introgressed from a number of wild relatives into cultivated varieties through laborious breeding programs. Here, we present two methods that we have developed to facilitate the screening for resistance to bacterial wilt in potato. The first one uses R. solanacearum reporter strains constitutively expressing the luxCDABE operon or the green fluorescent protein (gfp) to follow pathogen colonization in potato germplasm. Luminescent strains are used for nondestructive live imaging, while fluorescent ones enable precise pathogen visualization inside the plant tissues through confocal microscopy. The second method is a BIO-multiplex-PCR assay that is useful for sensitive and specific detection of viable R. solanacearum (IIB-1) cells in latently infected potato plants. This BIO-multiplex-PCR assay can specifically detect IIB-1 sequevar strains as well as strains belonging to all four R. solanacearum phylotypes and is sensitive enough to detect without DNA extraction ten bacterial cells per mL in complex samples.The described methods allow the detection of latent infections in roots and stems of asymptomatic plants and were shown to be efficient tools to assist potato breeding programs.

Identifiants

pubmed: 34448170
doi: 10.1007/978-1-0716-1609-3_18
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

375-385

Informations de copyright

© 2021. Springer Science+Business Media, LLC, part of Springer Nature.

Références

Mansfield J, Genin S, Magori S et al (2012) Top 10 plant pathogenic bacteria in molecular plant pathology. Mol Plant Pathol 13:614–629
doi: 10.1111/j.1364-3703.2012.00804.x
Safni I, Cleenwerck I, De Vos P et al (2014) Polyphasic taxonomic revision of the Ralstonia solanacearum species complex: proposal to emend the descriptions of Ralstonia solanacearum and Ralstonia syzygii and reclassify current R. syzygii strains as Ralstonia syzygii subsp. syzygii subsp. nov., R. solanacearum phylotype IV strains as Ralstonia syzygii subsp. indonesiensis subsp. nov., banana blood disease bacterium strains as Ralstonia syzygii subsp. celebesensis subsp. nov. and R. solanacearum phylotype I and III strains as Ralstonia pseudosolanacearum sp. nov. Int J Syst Evol Microbiol 64:3087–3103
doi: 10.1099/ijs.0.066712-0
Siri MI, Sanabria A, Pianzzola MJ (2011) Genetic diversity and aggressiveness of Ralstonia solanacearum strains causing bacterial wilt of potato in Uruguay. Plant Dis 95:1292–1301
doi: 10.1094/PDIS-09-10-0626
Huet G (2014) Breeding for resistances to Ralstonia solanacearum. Front Plant Sci 715:1–5
Fock I, Collonnier C, Purwito A et al (2000) Resistance to bacterial wilt in somatic hybrids between Solanum tuberosum and Solanum phureja. Plant Sci 160:165–176
doi: 10.1016/S0168-9452(00)00375-7
Carputo D, Aversano R, Barone A et al (2009) Resistance to Ralstonia solanacearum of sexual hybrids between Solanum commersonii and S. tuberosum. Am J Potato Res 86:196–202
doi: 10.1007/s12230-009-9072-4
Siri MI, Galván G, Quirici L et al (2009) Molecular marker diversity and bacterial wilt resistance in wild Solanum commersonii accessions from Uruguay. Euphytica 165:371–382
doi: 10.1007/s10681-008-9800-8
Gonzalez M, Galvan G, Siri MI et al (2013) Resistencia a la marchitez bacteriana de la papa en Solanum commersonii Dun. Agrociencia 17:45–54
Gutarra L, Kreuze J, Lindqvist-Kreuze H, De Mendiburu F (2014) Variation of resistance to different strains of Ralstonia solanacearum in highland tropics adapted potato genotypes. Am J Potato Res 92:258–265
doi: 10.1007/s12230-014-9426-4
Cruz APZ, Ferreira V, Pianzzola MJ et al (2014) A novel, sensitive method to evaluate potato germplasm for bacterial wilt resistance using a luminescent Ralstonia solanacearum reporter strain. Mol Plant-Microbe Interact 27:277–285
doi: 10.1094/MPMI-10-13-0303-FI
Ferreira V, Pianzzola MJ, Vilaró F et al (2017) Interspecific potato breeding lines display differential colonisation patterns and induced defense responses after Ralstonia solanacearum infection. Front Plant Sci 8:1424–1437
doi: 10.3389/fpls.2017.01424
Guarischi-Sousa R, Puigvert M, Coll NS et al (2016) Complete genome sequence of the potato pathogen Ralstonia solanacearum UY031. Stand Genomic Sci 11:7–14
doi: 10.1186/s40793-016-0131-4
Elphinstone JG, Hennessy J, Wilson JK, Stead DE (1996) Sensitivity of different methods for the detection of Ralstonia solanacearum in potato tuber extracts. EPPO Bull 26:663–678
doi: 10.1111/j.1365-2338.1996.tb01511.x
Opina N, Tavner F, Hollway G et al (1997) A novel method for development of species and strain-specific DNA probes and PCR primers for identifying Burkholderia solanacearum (formerly Pseudomonas solanacearum). Asia Pac J Mol Biol Biotechnol 5:19–30

Auteurs

Virginia Ferreira (V)

Área Microbiología, Departamento de Biociencias (DEPBIO), Facultad de Química, Universidad de la República, Montevideo, Uruguay.

Matías González (M)

Instituto Nacional de Investigaciones Agropecuarias (INIA), Estación Experimental Salto Grande, Salto, Uruguay.

María Julia Pianzzola (MJ)

Área Microbiología, Departamento de Biociencias (DEPBIO), Facultad de Química, Universidad de la República, Montevideo, Uruguay.

Núria S Coll (NS)

Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Catalonia, Spain.

María Inés Siri (MI)

Área Microbiología, Departamento de Biociencias (DEPBIO), Facultad de Química, Universidad de la República, Montevideo, Uruguay. msiri@fq.edu.uy.

Marc Valls (M)

Centre for Research in Agricultural Genomics (CSIC-IRTA-UAB-UB), Bellaterra, Catalonia, Spain. marcvalls@ub.edu.
Department of Genetics, University of Barcelona, Barcelona, Catalonia, Spain. marcvalls@ub.edu.

Articles similaires

Genome, Viral Ralstonia Composting Solanum lycopersicum Bacteriophages
Capsicum Disease Resistance Plant Diseases Polymorphism, Single Nucleotide Ralstonia solanacearum
Genome, Bacterial Virulence Phylogeny Genomics Plant Diseases
Plant Diseases Paenibacillus Paenibacillus polymyxa Biological Control Agents Fusarium

Classifications MeSH