Genetically encoded cell-death indicators (GEDI) to detect an early irreversible commitment to neurodegeneration.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
06 09 2021
Historique:
received: 18 12 2019
accepted: 16 08 2021
entrez: 7 9 2021
pubmed: 8 9 2021
medline: 6 10 2021
Statut: epublish

Résumé

Cell death is a critical process that occurs normally in health and disease. However, its study is limited due to available technologies that only detect very late stages in the process or specific death mechanisms. Here, we report the development of a family of fluorescent biosensors called genetically encoded death indicators (GEDIs). GEDIs specifically detect an intracellular Ca

Identifiants

pubmed: 34489414
doi: 10.1038/s41467-021-25549-9
pii: 10.1038/s41467-021-25549-9
pmc: PMC8421388
doi:

Substances chimiques

DNA-Binding Proteins 0
Fluorescent Dyes 0
SOD1 protein, human 0
TARDBP protein, human 0
alpha-Synuclein 0
enhanced green fluorescent protein 0
Green Fluorescent Proteins 147336-22-9
Glutamic Acid 3KX376GY7L
Superoxide Dismutase-1 EC 1.15.1.1
Calcium SY7Q814VUP

Types de publication

Journal Article Research Support, N.I.H., Extramural Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

5284

Subventions

Organisme : NIA NIH HHS
ID : RF1 AG064170
Pays : United States
Organisme : NIMH NIH HHS
ID : U01 MH115747
Pays : United States
Organisme : NIA NIH HHS
ID : RF1 AG056151
Pays : United States
Organisme : NIA NIH HHS
ID : P01 AG054407
Pays : United States
Organisme : NINDS NIH HHS
ID : U54 NS091046
Pays : United States
Organisme : NCRR NIH HHS
ID : C06 RR018928
Pays : United States
Organisme : NIA NIH HHS
ID : RF1 AG058476
Pays : United States
Organisme : NIA NIH HHS
ID : RF1 AG058447
Pays : United States
Organisme : NINDS NIH HHS
ID : R37 NS101996
Pays : United States
Organisme : NLM NIH HHS
ID : R01 LM013617
Pays : United States

Informations de copyright

© 2021. The Author(s).

Références

Nat Commun. 2014 Jun 13;5:4153
pubmed: 24923787
Nucleic Acids Res. 2016 Jul 8;44(W1):W3-W10
pubmed: 27137889
PLoS One. 2017 Aug 2;12(8):e0181010
pubmed: 28767661
Neuroreport. 1994 Oct 3;5(15):1901-5
pubmed: 7841372
Nat Chem Biol. 2013 Sep;9(9):586-92
pubmed: 23873212
Curr Opin Neurobiol. 2009 Oct;19(5):537-43
pubmed: 19889533
Proc Natl Acad Sci U S A. 2005 Mar 8;102(10):3840-5
pubmed: 15738408
Nat Biotechnol. 2009 Mar;27(3):275-80
pubmed: 19252484
Proc Natl Acad Sci U S A. 2015 Jun 23;112(25):7821-6
pubmed: 26056265
Commun Biol. 2019 May 1;2:155
pubmed: 31069265
J Neurosci. 2010 Jan 13;30(2):639-49
pubmed: 20071528
Proc Natl Acad Sci U S A. 2017 Jan 31;114(5):1165-1170
pubmed: 28028237
Proc Natl Acad Sci U S A. 2017 Jan 10;114(2):E228-E236
pubmed: 28003463
Neuron. 2015 Apr 8;86(1):160-74
pubmed: 25856492
Nat Protoc. 2008;3(6):948-54
pubmed: 18536643
Comput Struct Biotechnol J. 2015 Mar 28;13:212-21
pubmed: 25893083
J Neurosci. 2012 Sep 12;32(37):12973-8
pubmed: 22973021
Fish Physiol Biochem. 2012 Feb;38(1):201-18
pubmed: 22160749
Zebrafish. 2013 Mar;10(1):70-86
pubmed: 23590400
Cell Calcium. 2006 Mar;39(3):227-36
pubmed: 16368137
Nat Rev Neurosci. 2017 Jan 20;18(2):101-113
pubmed: 28104909
Cell Death Discov. 2018 Oct 3;4:45
pubmed: 30302279
Proc Natl Acad Sci U S A. 2010 Sep 28;107(39):16982-7
pubmed: 20833817
Cell Stem Cell. 2014 Jun 5;14(6):796-809
pubmed: 24704493
Front Neural Circuits. 2014 Nov 26;8:138
pubmed: 25505384
Biophys J. 1999 Apr;76(4):1856-67
pubmed: 10096884
JAMA Neurol. 2013 May;70(5):600-6
pubmed: 23553344
J Psychiatry Neurosci. 2014 Mar;39(2):87-96
pubmed: 24083458
Nat Methods. 2010 Aug;7(8):634-6
pubmed: 20639868
Dev Dyn. 2007 Nov;236(11):3088-99
pubmed: 17937395
Proc Natl Acad Sci U S A. 2001 Mar 13;98(6):3197-202
pubmed: 11248055
Nature. 2013 Sep 5;501(7465):45-51
pubmed: 24005412
Science. 2016 Jun 10;352(6291):1319-22
pubmed: 27284193
Front Mol Neurosci. 2014 Nov 18;7:88
pubmed: 25477779
Neuron. 2017 Feb 22;93(4):867-881.e6
pubmed: 28162809
J Biol Chem. 2011 Jun 10;286(23):20710-26
pubmed: 21489994
Kidney Int. 2008 Sep;74(5):560-5
pubmed: 18596735
Nat Commun. 2013;4:2157
pubmed: 23857461
FASEB J. 2008 Jul;22(7):2243-52
pubmed: 18263700
Semin Cancer Biol. 2007 Apr;17(2):154-65
pubmed: 17210257
Nature. 2004 Oct 14;431(7010):805-10
pubmed: 15483602
J Neurosci. 2010 Aug 4;30(31):10541-50
pubmed: 20685997
Development. 1996 Dec;123:217-27
pubmed: 9007242
Methods Mol Biol. 2016;1451:355-66
pubmed: 27464821
Nat Chem Biol. 2014 Aug;10(8):677-85
pubmed: 24974230
Neurol Sci. 2009 Dec;30(6):517-20
pubmed: 19685200
Nature. 2013 Jul 18;499(7458):295-300
pubmed: 23868258
J Neurosci. 2016 Feb 24;36(8):2458-72
pubmed: 26911693
Nat Rev Mol Cell Biol. 2000 Oct;1(1):11-21
pubmed: 11413485
Int J Mol Sci. 2018 Oct 09;19(10):
pubmed: 30304824
Science. 2011 Sep 30;333(6051):1888-91
pubmed: 21903779
Annu Rev Pharmacol Toxicol. 2016;56:489-510
pubmed: 26514199
Cytogenet Genome Res. 2003;100(1-4):287-95
pubmed: 14526190
J Cell Biol. 1973 Dec;59(3):766-71
pubmed: 4128323
Nat Methods. 2017 Nov;14(11):1107-1114
pubmed: 28892088
Zebrafish. 2007 Summer;4(2):113-6
pubmed: 18041929
Cell Logist. 2012 Oct 1;2(4):176-188
pubmed: 23538475
Sci Rep. 2018 Nov 30;8(1):17522
pubmed: 30504838
J Neurophysiol. 2014 Aug 15;112(4):834-44
pubmed: 24848468
J Cell Mol Med. 2008 Dec;12(6A):2263-80
pubmed: 18624755
Neural Plast. 2016;2016:5815439
pubmed: 27382491
PLoS One. 2015 Mar 11;10(3):e0118266
pubmed: 25760436
Autophagy. 2007 Sep-Oct;3(5):452-60
pubmed: 17534139
J Neural Transm (Vienna). 2014 Aug;121(8):799-817
pubmed: 24578174
Genesis. 2011 Jul;49(7):546-54
pubmed: 21538811
J Neurobiol. 1998 Dec;37(4):622-32
pubmed: 9858263
Nat Rev Drug Discov. 2011 Mar;10(3):221-37
pubmed: 21358741
Nature. 1997 Aug 28;388(6645):882-7
pubmed: 9278050
Front Neurosci. 2015 Dec 16;9:469
pubmed: 26733784
Nat Chem Biol. 2011 Oct 30;7(12):925-34
pubmed: 22037470
Brain Pathol. 2018 Jan;28(1):3-13
pubmed: 28703923
J Neurosci. 2014 Jan 8;34(2):418-33
pubmed: 24403142
Cell Res. 2018 Jan;28(1):9-21
pubmed: 29076500
Neural Dev. 2012 Jun 27;7:23
pubmed: 22738203
JAMA Neurol. 2013 Sep 1;70(9):1158-66
pubmed: 23835471
J Neurophysiol. 1978 Jul;41(4):1026-39
pubmed: 681986
Nat Cell Biol. 2002 Jan;4(1):83-8
pubmed: 11744924
Expert Opin Drug Discov. 2019 Sep;14(9):901-913
pubmed: 31179783
Nat Neurosci. 2010 Apr;13(4):513-20
pubmed: 20305645
Curr Biol. 2016 Sep 12;26(17):2319-28
pubmed: 27524486
PLoS One. 2010 Jul 30;5(7):e11783
pubmed: 20689587
J Vasc Res. 1995 Nov-Dec;32(6):371-7
pubmed: 8562809
J Neurol Neurosurg Psychiatry. 2012 Jul;83(7):734-8
pubmed: 22566594
Curr Neurol Neurosci Rep. 2015 Jun;15(6):33
pubmed: 25903297
Neurotox Res. 2000;2(2-3):239-50
pubmed: 16787844
Nat Neurosci. 2009 Jul;12(7):857-63
pubmed: 19503084
J Biol Chem. 2010 Jan 1;285(1):339-48
pubmed: 19861418
Dev Cell. 2016 Jul 25;38(2):214-22
pubmed: 27424497
Chem Biol. 2011 Aug 26;18(8):1042-52
pubmed: 21867919
Biochim Biophys Acta Mol Basis Dis. 2017 Feb;1863(2):347-353
pubmed: 27902929
PLoS One. 2014 Aug 04;9(8):e103751
pubmed: 25090007
Ann Neurol. 2011 Oct;70(4):532-40
pubmed: 22028219
Proc Natl Acad Sci U S A. 2011 Mar 29;108(13):5425-30
pubmed: 21383146
Mar Biotechnol (NY). 2001 Nov;3(6):522-7
pubmed: 14961324
Cell Rep. 2017 Oct 24;21(4):1102-1115
pubmed: 29069591
Nat Neurosci. 2016 Aug 26;19(9):1142-53
pubmed: 27571193
Front Neurosci. 2017 Nov 28;11:647
pubmed: 29234268
Cell Death Differ. 2018 Mar;25(3):486-541
pubmed: 29362479
Brain. 2006 Apr;129(Pt 4):953-62
pubmed: 16467388
Cold Spring Harb Perspect Med. 2012 Aug 01;2(8):
pubmed: 22908196
Antioxid Redox Signal. 2015 Jan 10;22(2):161-74
pubmed: 24628477
FASEB J. 2010 Nov;24(11):4336-42
pubmed: 20601526
Front Neural Circuits. 2013 Jun 06;7:104
pubmed: 23761738

Auteurs

Jeremy W Linsley (JW)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Kevan Shah (K)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Nicholas Castello (N)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Michelle Chan (M)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Dominik Haddad (D)

Gladstone Institute of Neurologic Disease, San Francisco, CA, USA.

Zak Doric (Z)

Gladstone Institute of Neurologic Disease, San Francisco, CA, USA.
Neuroscience Graduate Program, University of California, San Francisco, CA, USA.

Shijie Wang (S)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Wiktoria Leks (W)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Jay Mancini (J)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Viral Oza (V)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Ashkan Javaherian (A)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA.

Ken Nakamura (K)

Gladstone Institute of Neurologic Disease, San Francisco, CA, USA.
Biomedical Sciences and Neuroscience Graduate Program, University of California, San Francisco, CA, USA.
Department of Neurology, University of California, San Francisco, CA, USA.

David Kokel (D)

Department of Physiology, University of California, San Francisco, CA, USA.
Institute for Neurodegenerative Disease, University of California, San Francisco, CA, USA.

Steven Finkbeiner (S)

Gladstone Center for Systems and Therapeutics, San Francisco, CA, USA. sfinkbeiner@gladstone.ucsf.edu.
Taube/Koret Center for Neurodegenerative Disease, Gladstone Institutes, San Francisco, CA, USA. sfinkbeiner@gladstone.ucsf.edu.

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Classifications MeSH