Phylogenetic classification of ten novel species belonging to the genus Bifidobacterium comprising B. phasiani sp. nov., B. pongonis sp. nov., B. saguinibicoloris sp. nov., B. colobi sp. nov., B. simiiventris sp. nov., B. santillanense sp. nov., B. miconis sp. nov., B. amazonense sp. nov., B. pluvialisilvae sp. nov., and B. miconisargentati sp. nov.

Animals Bacterial Typing Techniques Base Composition Bifidobacterium / genetics DNA, Bacterial / genetics Fatty Acids Feces Phylogeny RNA, Ribosomal, 16S / genetics Sequence Analysis, DNA
Bifidobacteria Genomics Metagenomics Phylogenetic

Journal

Systematic and applied microbiology
ISSN: 1618-0984
Titre abrégé: Syst Appl Microbiol
Pays: Germany
ID NLM: 8306133

Informations de publication

Date de publication:
Nov 2021
Historique:
received: 26 07 2021
revised: 27 09 2021
accepted: 04 10 2021
pubmed: 30 10 2021
medline: 26 11 2021
entrez: 29 10 2021
Statut: ppublish

Résumé

Ten Bifidobacterium strains, i.e., 6T3, 64T4, 79T10, 80T4, 81T8, 82T1, 82T10, 82T18, 82T24, and 82T25, were isolated from mantled guereza (Colobus guereza), Sumatran orangutan (Pongo abeli), silvery marmoset (Mico argentatus), golden lion tamarin (Leontopithecus rosalia), pied tamarin (Saguinus bicolor), and common pheasant (Phaisanus colchinus). Cells are Gram-positive, non-motile, non-sporulating, facultative anaerobic, and fructose 6-phosphate phosphoketolase-positive. Phylogenetic analyses based on the core genome sequences revealed that isolated strains exhibit close phylogenetic relatedness with Bifidobacterium genus members belonging to the Bifidobacterium bifidum, Bifidobacterium longum, Bifidobacterium pullorum, and Bifidobacterium tissieri phylogenetic groups. Phenotypic characterization and genotyping based on the genome sequences clearly show that these strains are distinct from each of the type strains of the so far recognized Bifidobacterium species. Thus, B. phasiani sp. nov. (6T3 = LMG 32224

Identifiants

DOI: 10.1016/j.syapm.2021.126273 PMID: 34715437
pubmed: 34715437
pii: S0723-2020(21)00096-5
doi: 10.1016/j.syapm.2021.126273
pii:
doi:

Substances chimiques

DNA, Bacterial 0
Fatty Acids 0
RNA, Ribosomal, 16S 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

126273

Informations de copyright

Copyright © 2021 Elsevier GmbH. All rights reserved.

Auteurs

Gabriele Andrea Lugli (GA)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

Ines Calvete-Torre (I)

Department of Microbiology and Biochemistry of Dairy Products, Dairy Research Institute of Asturias, Spanish National Research Council (IPLA-CSIC), Paseo Río Linares sn 33300 Villaviciosa, Asturias, Spain; Functionality and Ecology of Beneficial Microbes (MicroHealth) Group, Instituto de Investigación Sanitaria del Principado de Asturias (ISPA), Avda. Roma s/n, 33011 Oviedo, Asturias, Spain.

Giulia Alessandri (G)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy.

Christian Milani (C)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy; Microbiome Research Hub, University of Parma, 43124 Parma, Italy.

Francesca Turroni (F)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy; Microbiome Research Hub, University of Parma, 43124 Parma, Italy.

Paola Laiolo (P)

Biodiversity Research Institute (CSIC, Oviedo University, Principality of Asturias), Mieres, Spain.

Maria Cristina Ossiprandi (MC)

Microbiome Research Hub, University of Parma, 43124 Parma, Italy; Department of Veterinary Medical Science, University of Parma, Parma, Italy.

Abelardo Margolles (A)

Department of Microbiology and Biochemistry of Dairy Products, Dairy Research Institute of Asturias, Spanish National Research Council (IPLA-CSIC), Paseo Río Linares sn 33300 Villaviciosa, Asturias, Spain; Functionality and Ecology of Beneficial Microbes (MicroHealth) Group, Instituto de Investigación Sanitaria del Principado de Asturias (ISPA), Avda. Roma s/n, 33011 Oviedo, Asturias, Spain.

Lorena Ruiz (L)

Department of Microbiology and Biochemistry of Dairy Products, Dairy Research Institute of Asturias, Spanish National Research Council (IPLA-CSIC), Paseo Río Linares sn 33300 Villaviciosa, Asturias, Spain; Functionality and Ecology of Beneficial Microbes (MicroHealth) Group, Instituto de Investigación Sanitaria del Principado de Asturias (ISPA), Avda. Roma s/n, 33011 Oviedo, Asturias, Spain. Electronic address: lorena.ruiz@ipla.csic.es.

Marco Ventura (M)

Laboratory of Probiogenomics, Department of Chemistry, Life Sciences, and Environmental Sustainability, University of Parma, 43124 Parma, Italy; Microbiome Research Hub, University of Parma, 43124 Parma, Italy. Electronic address: marco.ventura@unipr.it.

Articles similaires

Comprehensive comparative analysis and development of molecular markers for Lasianthus species based on complete chloroplast genome sequences.

Yue Zhang, Meifang Song, Deying Tang et al.
1.00
Genome, Chloroplast Phylogeny Genetic Markers Base Composition High-Throughput Nucleotide Sequencing

Evaluating the efficacy of telesurgery with dual console SSI Mantra Surgical Robotic System: experiment on animal model and clinical trials.

Sudhir Prem Srivastava, Vishwajyoti Pascual Srivastava, Avinesh Singh et al.
1.00
Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell

FBXO22 inhibits colitis and colorectal carcinogenesis by regulating the degradation of the S2448-phosphorylated form of mTOR.

Minle Li, Xuan Chen, Pengfei Qu et al.
1.00
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice

Classifications MeSH

questionsmedicales.fr › Eucaryotes › Animaux › Phylogenetic classification of ten novel...
questionsmedicales.fr › Techniques d'investigation › Techniques de laboratoire clinique › Techniques microbiologiques › Techniques bactériologiques › Techniques de typage bactérien › Phylogenetic classification of ten novel...
questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Composition en bases nucléiques › Phylogenetic classification of ten novel...
questionsmedicales.fr › Bactéries › Bactéries à Gram positif › Bâtonnets à Gram positif › Bâtonnets asporogènes à Gram positif › Bâtonnets asporogènes irréguliers à Gram positif › Actinobacteria › Bifidobacterium › Phylogenetic classification of ten novel...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ADN › ADN bactérien › Phylogenetic classification of ten novel...
questionsmedicales.fr › Lipides › Acides gras › Phylogenetic classification of ten novel...
questionsmedicales.fr › Liquides et sécrétions biologiques › Fèces › Phylogenetic classification of ten novel...
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Phylogenetic classification of ten novel...
questionsmedicales.fr › Acides nucléiques, nucléotides et nucléosides › Acides nucléiques › ARN › ARN ribosomique › ARN ribosomique 16S › Phylogenetic classification of ten novel...
questionsmedicales.fr › Techniques d'investigation › Techniques génétiques › Analyse de séquence › Analyse de séquence d'ADN › Phylogenetic classification of ten novel...