Smad4 controls signaling robustness and morphogenesis by differentially contributing to the Nodal and BMP pathways.


Journal

Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555

Informations de publication

Date de publication:
04 11 2021
Historique:
received: 17 03 2021
accepted: 07 10 2021
entrez: 5 11 2021
pubmed: 6 11 2021
medline: 24 12 2021
Statut: epublish

Résumé

The transcriptional effector SMAD4 is a core component of the TGF-β family signaling pathways. However, its role in vertebrate embryo development remains unresolved. To address this, we deleted Smad4 in zebrafish and investigated the consequences of this on signaling by the TGF-β family morphogens, BMPs and Nodal. We demonstrate that in the absence of Smad4, dorsal/ventral embryo patterning is disrupted due to the loss of BMP signaling. However, unexpectedly, Nodal signaling is maintained, but lacks robustness. This Smad4-independent Nodal signaling is sufficient for mesoderm specification, but not for optimal endoderm specification. Furthermore, using Optical Projection Tomography in combination with 3D embryo morphometry, we have generated a BMP morphospace and demonstrate that Smad4 mutants are morphologically indistinguishable from embryos in which BMP signaling has been genetically/pharmacologically perturbed. Smad4 is thus differentially required for signaling by different TGF-β family ligands, which has implications for diseases where Smad4 is mutated or deleted.

Identifiants

pubmed: 34737283
doi: 10.1038/s41467-021-26486-3
pii: 10.1038/s41467-021-26486-3
pmc: PMC8569018
doi:

Substances chimiques

Bone Morphogenetic Proteins 0
Nodal Protein 0
Smad4 Protein 0
Transforming Growth Factor beta 0
Zebrafish Proteins 0
smad4a protein, zebrafish 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

6374

Subventions

Organisme : Wellcome Trust
Pays : United Kingdom
Organisme : Arthritis Research UK
ID : FC001095
Pays : United Kingdom
Organisme : Wellcome Trust
ID : FC001095
Pays : United Kingdom
Organisme : Medical Research Council
Pays : United Kingdom
Organisme : Cancer Research UK
Pays : United Kingdom

Informations de copyright

© 2021. The Author(s).

Références

Genome Biol. 2014;15(12):550
pubmed: 25516281
Elife. 2021 Jan 08;10:
pubmed: 33416497
Development. 2012 Sep;139(18):3343-54
pubmed: 22912414
Elife. 2017 Feb 13;6:
pubmed: 28191871
Dev Cell. 2006 Sep;11(3):313-23
pubmed: 16950123
Nat Rev Mol Cell Biol. 2018 Jul;19(7):419-435
pubmed: 29643418
Mol Cell Biol. 2000 Dec;20(23):9041-54
pubmed: 11074002
Bioinformatics. 2012 Aug 15;28(16):2184-5
pubmed: 22743226
Semin Cell Dev Biol. 2015 Jun;42:118-33
pubmed: 26123688
Bioinformatics. 2012 Jun 1;28(11):1530-2
pubmed: 22539670
Gene. 2000 Apr 4;246(1-2):69-80
pubmed: 10767528
EMBO J. 2004 Feb 25;23(4):844-56
pubmed: 14963489
Oncotarget. 2016 Jul 12;7(28):43939-43948
pubmed: 27259259
Development. 2006 Feb;133(3):385-94
pubmed: 16410409
Dev Biol. 1998 Jul 1;199(1):93-110
pubmed: 9676195
Development. 2004 Aug;131(15):3501-12
pubmed: 15215210
BMC Dev Biol. 2007 Jan 19;7:5
pubmed: 17239227
Biol Open. 2012 Aug 15;1(8):747-53
pubmed: 23213468
Mol Cell Biol. 2007 Sep;27(17):6068-83
pubmed: 17591695
Development. 2006 Jul;133(14):2757-70
pubmed: 16775002
Nat Rev Mol Cell Biol. 2007 Dec;8(12):970-82
pubmed: 18000526
Development. 2003 May;130(9):1837-51
pubmed: 12642489
Cold Spring Harb Perspect Biol. 2016 Oct 3;8(10):
pubmed: 27449814
Cell. 2003 Jun 13;113(6):685-700
pubmed: 12809600
Elife. 2020 Nov 11;9:
pubmed: 33174840
Cell. 1999 Apr 2;97(1):121-32
pubmed: 10199408
Sci Signal. 2019 Feb 26;12(570):
pubmed: 30808818
PLoS Biol. 2021 Jan 22;19(1):e3001059
pubmed: 33481775
Trends Genet. 2017 Sep;33(9):616-628
pubmed: 28720483
Nature. 1996 Oct 24;383(6602):691-6
pubmed: 8878477
J Biophotonics. 2019 Dec;12(12):e201900128
pubmed: 31386281
Mech Dev. 2003 Jan;120(1):5-18
pubmed: 12490292
Sci Rep. 2015 Mar 05;5:8841
pubmed: 25740433
Proc Natl Acad Sci U S A. 2013 Aug 20;110(34):13904-9
pubmed: 23918387
Development. 2000 Jan;127(2):343-54
pubmed: 10603351
PLoS Genet. 2011 May;7(5):e1002072
pubmed: 21637786
Science. 2015 Jun 26;348(6242):aaa5838
pubmed: 26113727
Elife. 2018 Jan 29;7:
pubmed: 29376829
Elife. 2013 Dec 24;2:e00806
pubmed: 24368729
Dev Biol. 1998 Dec 15;204(2):361-72
pubmed: 9882476
Development. 1999 May;126(10):2149-59
pubmed: 10207140
Development. 1998 Apr;125(8):1433-45
pubmed: 9502724
Curr Opin Cell Biol. 2018 Apr;51:50-57
pubmed: 29153705
J Biol Chem. 2005 Oct 28;280(43):36158-64
pubmed: 16109720
Dev Cell. 2004 Aug;7(2):229-40
pubmed: 15296719
Dev Biol. 2002 Mar 1;243(1):81-98
pubmed: 11846479
Dev Cell. 2011 Jul 19;21(1):48-64
pubmed: 21763608
Science. 2002 Apr 19;296(5567):541-5
pubmed: 11964482
Development. 1997 Nov;124(22):4457-66
pubmed: 9409664
Dev Cell. 2018 Jan 22;44(2):179-191.e5
pubmed: 29275993
Science. 1996 Jan 19;271(5247):350-3
pubmed: 8553070
Nat Struct Mol Biol. 2010 Jan;17(1):69-76
pubmed: 20010841
Dev Cell. 2015 Oct 26;35(2):175-85
pubmed: 26506307
Genes Dev. 1998 Jan 1;12(1):107-19
pubmed: 9420335
Nature. 2019 Apr;568(7751):193-197
pubmed: 30944477
J Theor Biol. 2011 Jan 21;269(1):359-65
pubmed: 21044633
Genes Dev. 2003 Jul 1;17(13):1646-62
pubmed: 12842913
BMC Bioinformatics. 2011 Aug 04;12:323
pubmed: 21816040
Genes Dev. 2000 Feb 15;14(4):435-51
pubmed: 10691736
Cold Spring Harb Perspect Biol. 2018 Jun 1;10(6):
pubmed: 28600394
Cell. 2008 Jul 25;134(2):215-30
pubmed: 18662538
J Biol Chem. 2001 Nov 16;276(46):43175-81
pubmed: 11553622
ACS Chem Biol. 2010 Feb 19;5(2):245-53
pubmed: 20020776
Mol Cell Biol. 1999 Mar;19(3):1821-30
pubmed: 10022869
Elife. 2020 Feb 12;9:
pubmed: 32048988
Biochem J. 2004 Apr 1;379(Pt 1):209-16
pubmed: 14715079
Development. 1998 Apr;125(8):1407-20
pubmed: 9502722
Dev Biol. 2004 Jun 1;270(1):47-63
pubmed: 15136140
Proc Natl Acad Sci U S A. 2003 Mar 18;100(6):3315-20
pubmed: 12601179
Semin Cell Dev Biol. 2014 Aug;32:73-9
pubmed: 24704361
Bioinformatics. 2013 Jan 1;29(1):15-21
pubmed: 23104886
Nat Biotechnol. 2017 Apr 11;35(4):316-319
pubmed: 28398311
Dev Cell. 2002 May;2(5):617-27
pubmed: 12015969
Dev Cell. 2009 Mar;16(3):329-43
pubmed: 19289080
Development. 1996 Dec;123:81-93
pubmed: 9007231
Development. 2013 May;140(9):1970-80
pubmed: 23536566
Dev Biol. 2007 Apr 15;304(2):525-40
pubmed: 17306247
Cell. 2019 Jun 13;177(7):1888-1902.e21
pubmed: 31178118
Neuron. 2000 Nov;28(2):399-409
pubmed: 11144351
Annu Rev Genet. 2011;45:357-77
pubmed: 21942367
Curr Top Dev Biol. 2020;137:363-389
pubmed: 32143749
Cell. 2016 Feb 25;164(5):1015-30
pubmed: 26898331
Development. 2001 Mar;128(6):859-69
pubmed: 11222141
Cold Spring Harb Perspect Biol. 2009 Nov;1(5):a003459
pubmed: 20066122
Mol Pharmacol. 2004 Mar;65(3):744-52
pubmed: 14978253
Dev Dyn. 2009 Jun;238(6):1321-31
pubmed: 19441058
Development. 2014 Dec;141(24):4827-30
pubmed: 25411213
Dev Cell. 2008 Jan;14(1):108-19
pubmed: 18194657
Elife. 2017 Aug 31;6:
pubmed: 28857744
Elife. 2017 Aug 09;6:
pubmed: 28826472
Dev Biol. 2002 Oct 15;250(2):263-79
pubmed: 12376102
Dev Dyn. 1999 Nov;216(3):285-98
pubmed: 10590480
Development. 2004 Apr;131(8):1717-28
pubmed: 15084457
Dev Biol. 2013 Jun 15;378(2):170-82
pubmed: 23499658
J Mol Diagn. 2012 Jan;14(1):22-9
pubmed: 22166544
Nat Methods. 2012 Jul;9(7):671-5
pubmed: 22930834
Nature. 1997 Sep 4;389(6646):85-9
pubmed: 9288972
Dev Biol. 1999 Jun 15;210(2):251-68
pubmed: 10357889
Development. 2000 Mar;127(5):957-67
pubmed: 10662635
Nucleic Acids Res. 2017 Jan 4;45(D1):D635-D642
pubmed: 27899575
Nature. 1998 Sep 10;395(6698):181-5
pubmed: 9744277
Development. 2006 Oct;133(19):3767-75
pubmed: 16943278
PLoS One. 2009;4(2):e4368
pubmed: 19190757
Nucleic Acids Res. 2011 Nov 1;39(20):8712-27
pubmed: 21764776
Elife. 2017 Dec 07;6:
pubmed: 29215332
Development. 2003 Dec;130(23):5589-99
pubmed: 14522874
PLoS One. 2015 Aug 26;10(8):e0136213
pubmed: 26308086
EMBO J. 2006 Oct 4;25(19):4490-502
pubmed: 16990801

Auteurs

Luca Guglielmi (L)

Developmental Signalling Laboratory, The Francis Crick Institute, London, NW1 1AT, UK.

Claire Heliot (C)

Developmental Signalling Laboratory, The Francis Crick Institute, London, NW1 1AT, UK.

Sunil Kumar (S)

Advanced Light Microscopy, The Francis Crick Institute, London, NW1 1AT, UK.

Yuriy Alexandrov (Y)

Advanced Light Microscopy, The Francis Crick Institute, London, NW1 1AT, UK.

Ilaria Gori (I)

Developmental Signalling Laboratory, The Francis Crick Institute, London, NW1 1AT, UK.

Foteini Papaleonidopoulou (F)

Developmental Signalling Laboratory, The Francis Crick Institute, London, NW1 1AT, UK.

Christopher Barrington (C)

Bioinformatics and Biostatistics Facility, The Francis Crick Institute, London, NW1 1AT, UK.

Philip East (P)

Bioinformatics and Biostatistics Facility, The Francis Crick Institute, London, NW1 1AT, UK.

Andrew D Economou (AD)

Developmental Signalling Laboratory, The Francis Crick Institute, London, NW1 1AT, UK.

Paul M W French (PMW)

Department of Physics, Imperial College London, SW7 2AZ, London, UK.

James McGinty (J)

Department of Physics, Imperial College London, SW7 2AZ, London, UK.

Caroline S Hill (CS)

Developmental Signalling Laboratory, The Francis Crick Institute, London, NW1 1AT, UK. caroline.hill@crick.ac.uk.

Articles similaires

Robotic Surgical Procedures Animals Humans Telemedicine Models, Animal

Odour generalisation and detection dog training.

Lyn Caldicott, Thomas W Pike, Helen E Zulch et al.
1.00
Animals Odorants Dogs Generalization, Psychological Smell
Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice
Animals Tail Swine Behavior, Animal Animal Husbandry

Classifications MeSH