Context-aware genomic surveillance reveals hidden transmission of a carbapenemase-producing

Bacterial Proteins / chemistry Colistin / pharmacology Cross Infection / epidemiology Disease Outbreaks Drug Resistance, Bacterial Epidemiological Monitoring Germany / epidemiology Humans Klebsiella Infections / epidemiology Klebsiella pneumoniae / classification Membrane Transport Proteins / chemistry Models, Molecular Phylogeny Protein Conformation
KPC antimicrobial resistance colistin genomic surveillance meta-analysis plasmids

Journal

Microbial genomics
ISSN: 2057-5858
Titre abrégé: Microb Genom
Pays: England
ID NLM: 101671820

Informations de publication

Date de publication:
12 2021
Historique:
entrez: 16 12 2021
pubmed: 17 12 2021
medline: 29 3 2022
Statut: ppublish

Résumé

Genomic surveillance can inform effective public health responses to pathogen outbreaks. However, integration of non-local data is rarely done. We investigate two large hospital outbreaks of a carbapenemase-carrying

Identifiants

DOI: 10.1099/mgen.0.000741 PMID: 34913861 PMC: PMC8767333
pubmed: 34913861
doi: 10.1099/mgen.0.000741
pmc: PMC8767333
doi:

Substances chimiques

Bacterial Proteins 0
Membrane Transport Proteins 0
Colistin Z67X93HJG1

Types de publication

Journal Article Multicenter Study Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

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Auteurs

Adrian Viehweger (A)

Institute of Medical Microbiology and Virology, University Hospital Leipzig, Leipzig, Germany.

Christian Blumenscheit (C)

ZBS 6: Proteomics and Spectroscopy, Robert Koch Institute, Berlin, Germany.

Norman Lippmann (N)

Institute of Medical Microbiology and Virology, University Hospital Leipzig, Leipzig, Germany.

Kelly L Wyres (KL)

Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Australia.

Christian Brandt (C)

Institute for Infectious Diseases and Infection Control, Jena University Hospital, Jena, Germany.

Jörg B Hans (JB)

National Reference Center for multidrug-resistant Gram-negative bacteria, Department for Medical Microbiology, Ruhr-University Bochum, Bochum, Germany.

Martin Hölzer (M)

Methodology and Research Infrastructure, MF1 Bioinformatics, Robert Koch Institute, Berlin, Germany.

Luiz Irber (L)

Department of Population Health and Reproduction, University of California, Davis, Davis, California, USA.

Sören Gatermann (S)

National Reference Center for multidrug-resistant Gram-negative bacteria, Department for Medical Microbiology, Ruhr-University Bochum, Bochum, Germany.

Christoph Lübbert (C)

Division of Infectious Diseases and Tropical Medicine, Department of Medicine II, University Hospital Leipzig, Leipzig, Germany.

Mathias W Pletz (MW)

Institute for Infectious Diseases and Infection Control, Jena University Hospital, Jena, Germany.

Kathryn E Holt (KE)

Department of Infectious Diseases, Central Clinical School, Monash University, Melbourne, Australia.
Department of Infection Biology, London School of Hygiene and Tropical Medicine, London, UK.

Brigitte König (B)

Institute of Medical Microbiology and Virology, University Hospital Leipzig, Leipzig, Germany.

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Classifications MeSH

questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines bactériennes › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines membranaires › Perforines › Peptides antimicrobiens cationiques › Polymyxines › Colistine › Context-aware genomic surveillance reveals...
questionsmedicales.fr › États, signes et symptômes pathologiques › Processus pathologiques › Caractéristiques de la maladie › Maladie iatrogène › Infection croisée › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Épidémies de maladies › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Phénomènes physiologiques › Phénomènes pharmacologiques et toxicologiques › Phénomènes pharmacologiques › Résistance aux substances › Résistance microbienne aux médicaments › Résistance bactérienne aux médicaments › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Surveillance épidémiologique › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Régions géographiques › Europe › Allemagne › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Eucaryotes › Animaux › Chordés › Vertébrés › Mammifères › Eutheria › Primates › Haplorhini › Catarrhini › Hominidae › Humains › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Infection › Infections bactériennes et mycoses › Infections bactériennes › Infections bactériennes à Gram négatif › Infections à Enterobacteriaceae › Infections à Klebsiella › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Bactéries › Proteobacteria › Gammaproteobacteria › Enterobacteriaceae › Klebsiella › Klebsiella pneumoniae › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Acides aminés, peptides et protéines › Protéines › Protéines membranaires › Protéines de transport membranaire › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Techniques d'investigation › Modèles théoriques › Modèles moléculaires › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Sciences de l'information › Phylogenèse › Context-aware genomic surveillance reveals...
questionsmedicales.fr › Phénomènes chimiques › Phénomènes biochimiques › Conformation moléculaire › Conformation des protéines › Context-aware genomic surveillance reveals...