Detection and isolation of SARS-CoV-2 Eta variant from the international travelers and local residents of India.


Journal

Journal of medical virology
ISSN: 1096-9071
Titre abrégé: J Med Virol
Pays: United States
ID NLM: 7705876

Informations de publication

Date de publication:
07 2022
Historique:
revised: 11 02 2022
received: 06 01 2022
accepted: 22 02 2022
pubmed: 26 2 2022
medline: 21 5 2022
entrez: 25 2 2022
Statut: ppublish

Résumé

International travel has been the major source for the rapid spread of new SARS-CoV-2 variants across the globe. During SARS-CoV-2 genomic surveillance, a total of 212 SARS-CoV-2 positive clinical specimens were sequenced using next-generation sequencing. A complete SARS-CoV-2 genome could be retrieved from 90 clinical specimens. Of them, 14 sequences belonged to the Eta variant from clinical specimens of international travelers (n = 12) and local residents (n = 2) of India, and 76 belonged to other SARS-CoV-2 variants. Of all the Eta-positive specimens, the virus isolates were obtained from the clinical specimens of six international travelers. Many variants of interest have been found to cause substantial community transmission or cluster infections. The detection of this variant with lethal E484K mutation across the globe and India necessitates persistent genomic surveillance of the SARS-CoV-2 variants, which would aid in taking preventive action.

Identifiants

pubmed: 35211985
doi: 10.1002/jmv.27676
pmc: PMC9088542
doi:

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

3404-3409

Informations de copyright

© 2022 Wiley Periodicals LLC.

Références

Nature. 2021 Aug;596(7871):273-275
pubmed: 34111888
Indian J Med Res. 2020 Feb & Mar;151(2 & 3):244-250
pubmed: 32362649
J Med Virol. 2022 Jul;94(7):3404-3409
pubmed: 35211985
Clin Infect Dis. 2021 Aug 19;:
pubmed: 34410361
Viruses. 2021 May 27;13(6):
pubmed: 34071984
Ticks Tick Borne Dis. 2019 Jan;10(1):23-33
pubmed: 30181094

Auteurs

Pragya D Yadav (PD)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Dimpal A Nyayanit (DA)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Nivedita Gupta (N)

Indian Council of Medical Research, V. Ramalingaswami Bhawan, New Delhi, India.

Jayanthi Shastri (J)

Molecular Diagnostic Reference Laboratory, Kasturba Hospital for Infectious Diseases, Mumbai, India.

Rima R Sahay (RR)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Deepak Y Patil (DY)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Anita M Shete (A)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Alpana Razdan (A)

Genestrings Diagnostic Centre Pvt. Ltd, New Delhi, India.

Sachee Agrawal (S)

Molecular Diagnostic Reference Laboratory, Kasturba Hospital for Infectious Diseases, Mumbai, India.

Abhinendra Kumar (A)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Triparna Majumdar (T)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Savita Patil (S)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Prasad Sarkale (P)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Shreekant Baradkar (S)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Manisha Dudhmal (M)

Indian Council of Medical Research-National Institute of Virology, Pune, India.

Harmanmeet Kaur (H)

Indian Council of Medical Research, V. Ramalingaswami Bhawan, New Delhi, India.

Neeraj Aggarwal (N)

Indian Council of Medical Research, V. Ramalingaswami Bhawan, New Delhi, India.

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Classifications MeSH