Next-Generation Sequencing for Confronting Virus Pandemics.
COVID-19
NGS
SARS-CoV-2
deep-sequencing
diagnostic tools
pandemics
variability
viruses
zoonosis
Journal
Viruses
ISSN: 1999-4915
Titre abrégé: Viruses
Pays: Switzerland
ID NLM: 101509722
Informations de publication
Date de publication:
14 03 2022
14 03 2022
Historique:
received:
07
02
2022
revised:
01
03
2022
accepted:
10
03
2022
entrez:
26
3
2022
pubmed:
27
3
2022
medline:
1
4
2022
Statut:
epublish
Résumé
Virus pandemics have happened, are happening and will happen again. In recent decades, the rate of zoonotic viral spillover into humans has accelerated, mirroring the expansion of our global footprint and travel network, including the expansion of viral vectors and the destruction of natural spaces, bringing humans closer to wild animals. Once viral cross-species transmission to humans occurs, transmission cannot be stopped by cement walls but by developing barriers based on knowledge that can prevent or reduce the effects of any pandemic. Controlling a local transmission affecting few individuals is more efficient that confronting a community outbreak in which infections cannot be traced. Genetic detection, identification, and characterization of infectious agents using next-generation sequencing (NGS) has been proven to be a powerful tool allowing for the development of fast PCR-based molecular assays, the rapid development of vaccines based on mRNA and DNA, the identification of outbreaks, transmission dynamics and spill-over events, the detection of new variants and treatment of vaccine resistance mutations, the development of direct-acting antiviral drugs, the discovery of relevant minority variants to improve knowledge of the viral life cycle, strengths and weaknesses, the potential for becoming dominant to take appropriate preventive measures, and the discovery of new routes of viral transmission.
Identifiants
pubmed: 35337007
pii: v14030600
doi: 10.3390/v14030600
pmc: PMC8950049
pii:
doi:
Substances chimiques
Antiviral Agents
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Review
Langues
eng
Sous-ensembles de citation
IM
Subventions
Organisme : Direcció General de Recerca (DGRIS). Generalitat de Catalunya
ID : DGRIS
Organisme : Spanish network for the research in infectious diseases
ID : REIPI RD16/0016/0003
Organisme : Centre for Industrial Technological Development
ID : IDI-20200297
Organisme : Gilead Sciences (Spain)
ID : GLD21_00006
Organisme : Instituto de Salud Carlos III
ID : PI19/00301
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