Anomalously Small Reorganization Energy of the Half Redox Reaction of Azurin.


Journal

The journal of physical chemistry. B
ISSN: 1520-5207
Titre abrégé: J Phys Chem B
Pays: United States
ID NLM: 101157530

Informations de publication

Date de publication:
28 04 2022
Historique:
pubmed: 16 4 2022
medline: 30 4 2022
entrez: 15 4 2022
Statut: ppublish

Résumé

Small values of the reorganization energy, 0.2-0.3 eV, were reported by electrochemical kinetic measurements for the half redox reaction of the redox-active protein azurin. This theoretical study explores possible mechanisms for the low activation barrier for electrochemical protein electron transfer: (1) electronic polarizability of the active site, (2) altering protonation states of far-away histidine residues not directly connected to the active site, and (3) a partial desolvation of the protein when attached to the electrode. The last mechanism provides the most robust explanation of the observations. Constraints imposed by the protein fold on its ability to sample the configuration space lead to the breakdown of the fluctuation-dissipation relation (FDR) and a strong separation of the Stokes-shift and variance reorganization energies. The resulting nonergodic kinetic reorganization energy observed experimentally is significantly lowered compared to predictions of standard models based on Gibbsian statistics and the FDR. The fast rate of protein electron transfer is directly related to the ability of the protein scaffold to maintain nonequilibrium statistics of electrostatic fluctuations projected on the electron-transfer reaction coordinate.

Identifiants

pubmed: 35426669
doi: 10.1021/acs.jpcb.2c00338
doi:

Substances chimiques

Proteins 0
Azurin 12284-43-4

Types de publication

Journal Article Research Support, U.S. Gov't, Non-P.H.S.

Langues

eng

Sous-ensembles de citation

IM

Pagination

3000-3011

Auteurs

Setare M Sarhangi (SM)

Department of Physics, Arizona State University, P.O. Box 871504, Tempe, Arizona 85287-1504, United States.

Dmitry V Matyushov (DV)

School of Molecular Sciences and Department of Physics, Arizona State University, P.O. Box 871504, Tempe, Arizona 85287-1504, United States.

Articles similaires

Databases, Protein Protein Domains Protein Folding Proteins Deep Learning

A molecular mechanism for bright color variation in parrots.

Roberto Arbore, Soraia Barbosa, Jindich Brejcha et al.
1.00
Animals Feathers Pigmentation Parrots Aldehyde Dehydrogenase
Receptor, Cannabinoid, CB1 Ligands Molecular Dynamics Simulation Protein Binding Thermodynamics
Osteosarcoma Animals Glutathione Oxidation-Reduction Mice

Classifications MeSH