Differential translation elongation directs protein synthesis in response to acute glucose deprivation in yeast.
Translation regulation
glucose starvation
ribosome profiling
ribosome runoff
translation elongation
Journal
RNA biology
ISSN: 1555-8584
Titre abrégé: RNA Biol
Pays: United States
ID NLM: 101235328
Informations de publication
Date de publication:
2022
2022
Historique:
entrez:
2
5
2022
pubmed:
3
5
2022
medline:
4
5
2022
Statut:
ppublish
Résumé
Protein synthesis is energetically expensive and its rate is influenced by factors such as cell type and environment. Suppression of translation is a canonical response to stressful changes in the cellular environment. In particular, inhibition of the initiation step of translation has been highlighted as the key control step in stress-induced translational suppression as mechanisms that quickly suppress initiation are well-conserved. However, cells have evolved complex regulatory means to control translation apart from initiation. Here, we examine the role of the elongation step of translation in yeast subjected to acute glucose deprivation. The use of ribosome profiling and
Identifiants
pubmed: 35491906
doi: 10.1080/15476286.2022.2065784
pmc: PMC9067459
doi:
Substances chimiques
Saccharomyces cerevisiae Proteins
0
Glucose
IY9XDZ35W2
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
636-649Subventions
Organisme : NIGMS NIH HHS
ID : R35 GM128798
Pays : United States
Références
Mol Biol Cell. 2000 Mar;11(3):833-48
pubmed: 10712503
Cell. 2013 Jun 20;153(7):1589-601
pubmed: 23791185
Genome Biol. 2017 Oct 27;18(1):201
pubmed: 29078784
Mol Cell Biol. 2019 Apr 30;39(10):
pubmed: 30886123
Mol Cell. 2011 Dec 9;44(5):745-58
pubmed: 22152478
FEMS Yeast Res. 2010 Dec;10(8):1035-45
pubmed: 20738405
Cell Syst. 2020 Aug 26;11(2):145-160.e5
pubmed: 32710835
Cell Rep. 2019 Dec 24;29(13):4593-4607.e8
pubmed: 31875563
Bioinformatics. 2015 Jan 15;31(2):166-9
pubmed: 25260700
Sci Rep. 2017 Sep 4;7(1):10331
pubmed: 28871121
PLoS One. 2012;7(6):e38351
pubmed: 22675547
Yeast. 2004 Jun;21(8):661-70
pubmed: 15197731
Cell. 2013 May 23;153(5):1064-79
pubmed: 23706743
Genome Biol. 2009;10(3):R25
pubmed: 19261174
Sci Rep. 2019 Feb 28;9(1):3037
pubmed: 30816176
Nucleic Acids Res. 2016 Nov 16;44(20):e155
pubmed: 27903884
Nat Cell Biol. 2019 Feb;21(2):162-168
pubmed: 30664789
Nature. 2014 Oct 2;514(7520):117-21
pubmed: 25119046
Int J Mol Sci. 2019 Aug 19;20(16):
pubmed: 31430885
Bioinformatics. 2017 Jun 01;33(11):1735-1737
pubmed: 28158331
Yeast. 1989 Jul-Aug;5(4):285-90
pubmed: 2528863
Mol Cell. 2005 Mar 18;17(6):831-40
pubmed: 15780939
Mol Cell Biol. 2004 Apr;24(7):2998-3010
pubmed: 15024087
Trends Microbiol. 1998 Aug;6(8):314-9
pubmed: 9746941
Nature. 2003 Oct 16;425(6959):737-41
pubmed: 14562106
Cell Rep. 2016 Jan 5;14(1):22-31
pubmed: 26725116
Nat Cell Biol. 2019 Feb;21(2):116-117
pubmed: 30664788
Methods. 2017 Aug 15;126:112-129
pubmed: 28579404
iScience. 2021 Jan 19;24(2):102069
pubmed: 33554071
Science. 2009 Apr 10;324(5924):218-23
pubmed: 19213877
Cell. 2015 Mar 12;160(6):1111-24
pubmed: 25768907
Nucleic Acids Res. 2014 Nov 10;42(20):12668-80
pubmed: 25332393
Mol Cell. 2017 Apr 20;66(2):194-205.e5
pubmed: 28392174
Mol Biol Cell. 2019 Oct 1;30(21):2721-2736
pubmed: 31483745
Nucleic Acids Res. 2019 Jun 4;47(10):4974-4985
pubmed: 30916348
Mol Syst Biol. 2014 Dec 23;10:770
pubmed: 25538139
Biochim Biophys Acta. 2013 Nov;1830(11):5204-10
pubmed: 23911748
J Cell Biol. 2018 Dec 3;217(12):4124-4140
pubmed: 30322972
Adv Biol Regul. 2014 May;55:15-27
pubmed: 24853390
J Bacteriol. 1983 Jan;153(1):163-8
pubmed: 6336730
Cell Rep. 2016 Feb 23;14(7):1787-1799
pubmed: 26876183
STAR Protoc. 2020 Dec 30;2(1):100250
pubmed: 33458709
Proc Natl Acad Sci U S A. 2001 May 8;98(10):5625-30
pubmed: 11344302
J Bacteriol. 1973 Jul;115(1):9-14
pubmed: 4577756
PLoS Comput Biol. 2019 May 23;15(5):e1007070
pubmed: 31120880
Biochim Biophys Acta. 2011 Jun;1807(6):568-76
pubmed: 20804724
Genome Res. 2015 Aug;25(8):1196-205
pubmed: 26122911
FEMS Yeast Res. 2018 Aug 1;18(5):
pubmed: 29617770
BMC Biol. 2006 Sep 05;4:30
pubmed: 16953894
iScience. 2019 Oct 25;20:466-480
pubmed: 31627132
Mol Cell. 2019 Mar 7;73(5):959-970.e5
pubmed: 30686592
Proc Natl Acad Sci U S A. 2019 Jul 23;116(30):15023-15032
pubmed: 31292258
Mol Cell. 2013 Feb 7;49(3):439-52
pubmed: 23290915
Proc Natl Acad Sci U S A. 2012 Oct 23;109(43):17394-9
pubmed: 23045643
Yeast. 2016 May;33(5):191-200
pubmed: 26860732
Exp Mol Med. 2001 Dec 31;33(4):198-204
pubmed: 11795480
Science. 2005 Oct 21;310(5747):486-9
pubmed: 16141371
Bioessays. 2019 May;41(5):e1900009
pubmed: 31026340
Yeast. 2015 Aug;32(8):567-81
pubmed: 26081484
J Biol Chem. 2014 Aug 22;289(34):23901-16
pubmed: 25012662
Oncogene. 1999 Nov 1;18(45):6121-8
pubmed: 10557103
PLoS Biol. 2019 Sep 18;17(9):e3000396
pubmed: 31532761
Wiley Interdiscip Rev RNA. 2014 May-Jun;5(3):301-15
pubmed: 24375939
Curr Genet. 2019 Feb;65(1):201-212
pubmed: 29951697
Nucleic Acids Res. 2014;42(17):e134
pubmed: 25056308