Sodalis ligni Strain 159R Isolated from an Anaerobic Lignin-Degrading Consortium.
anaerobic catabolic pathways
aromatic compounds
aromatic metabolism
endosymbionts
lignocellulosic biofuel
Journal
Microbiology spectrum
ISSN: 2165-0497
Titre abrégé: Microbiol Spectr
Pays: United States
ID NLM: 101634614
Informations de publication
Date de publication:
29 06 2022
29 06 2022
Historique:
pubmed:
18
5
2022
medline:
2
7
2022
entrez:
17
5
2022
Statut:
ppublish
Résumé
Novel bacterial isolates with the capabilities of lignin depolymerization, catabolism, or both, could be pertinent to lignocellulosic biofuel applications. In this study, we aimed to identify anaerobic bacteria that could address the economic challenges faced with microbial-mediated biotechnologies, such as the need for aeration and mixing. Using a consortium seeded from temperate forest soil and enriched under anoxic conditions with organosolv lignin as the sole carbon source, we successfully isolated a novel bacterium, designated 159R. Based on the 16S rRNA gene, the isolate belongs to the genus
Identifiants
pubmed: 35579457
doi: 10.1128/spectrum.02346-21
pmc: PMC9241852
doi:
Substances chimiques
DNA, Bacterial
0
RNA, Ribosomal, 16S
0
Lignin
9005-53-2
Types de publication
Journal Article
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0234621Références
Int J Syst Bacteriol. 1999 Jan;49 Pt 1:267-75
pubmed: 10028272
J Bacteriol. 2002 Mar;184(5):1444-8
pubmed: 11844776
J Comput Biol. 2015 May;22(5):377-86
pubmed: 25549288
Microb Genom. 2017 Jun 13;3(8):e000115
pubmed: 29026656
Biotechnol Biofuels. 2020 Feb 1;13:21
pubmed: 32021652
Int J Syst Evol Microbiol. 2016 Dec;66(12):5575-5599
pubmed: 27620848
Biodegradation. 2012 Jul;23(4):585-96
pubmed: 22307885
Appl Microbiol Biotechnol. 2019 May;103(10):3979-4002
pubmed: 30963208
BMC Genomics. 2020 Feb 24;21(1):182
pubmed: 32093618
J Bacteriol. 1998 Mar;180(5):1072-81
pubmed: 9495744
J Mol Biol. 1990 Oct 5;215(3):403-10
pubmed: 2231712
Nucleic Acids Res. 2016 Jul 8;44(W1):W242-5
pubmed: 27095192
Appl Environ Microbiol. 2004 Jan;70(1):432-40
pubmed: 14711672
Int J Biol Macromol. 2020 Oct 15;161:1099-1116
pubmed: 32526298
Bioinformatics. 2000 Jun;16(6):560-1
pubmed: 10980154
Appl Environ Microbiol. 1995 May;61(5):1839-42
pubmed: 16535025
Curr Opin Biotechnol. 2019 Apr;56:179-186
pubmed: 30530243
J Bacteriol. 2005 Sep;187(18):6258-64
pubmed: 16159757
Front Physiol. 2013 Mar 15;4:46
pubmed: 23508299
Nat Commun. 2013;4:2304
pubmed: 23942190
R Soc Open Sci. 2018 Jul 11;5(7):180369
pubmed: 30109092
Genome Biol Evol. 2014 Jan;6(1):76-93
pubmed: 24407854
Biotechnol Biofuels. 2018 Dec 27;11:338
pubmed: 30603046
Nucleic Acids Res. 2015 Aug 18;43(14):6761-71
pubmed: 26150420
Trends Microbiol. 2003 Jun;11(6):248-53
pubmed: 12823939
Curr Microbiol. 2021 Feb;78(2):856-866
pubmed: 33464391
Nucleic Acids Res. 2019 Jul 2;47(W1):W276-W282
pubmed: 30997504
FEMS Microbiol Ecol. 2000 Feb 1;31(2):143-152
pubmed: 10640667
FEBS J. 2009 Jan;276(1):58-75
pubmed: 19016852
Polymers (Basel). 2019 Apr 11;11(4):
pubmed: 30979077
Microbiol Mol Biol Rev. 2009 Mar;73(1):71-133
pubmed: 19258534
Curr Microbiol. 2008 Jun;56(6):603-8
pubmed: 18324435
Appl Environ Microbiol. 2016 May 16;82(11):3185-97
pubmed: 26994086
Stand Genomic Sci. 2015 Oct 26;10:86
pubmed: 26512311
mBio. 2019 Jan 2;10(1):
pubmed: 30602581
PeerJ. 2017 Dec 11;5:e4099
pubmed: 29250466
PeerJ. 2018 Jun 4;6:e4958
pubmed: 29888139
Appl Environ Microbiol. 2021 May 11;87(11):
pubmed: 33741620
PLoS Comput Biol. 2011 Oct;7(10):e1002195
pubmed: 22039361
Int J Syst Evol Microbiol. 2015 May;65(Pt 5):1400-1405
pubmed: 25782768
Nucleic Acids Res. 2014 Jan;42(Database issue):D633-42
pubmed: 24288368
Appl Environ Microbiol. 2013 Sep;79(17):5130-6
pubmed: 23793626
Nucleic Acids Res. 2019 Jan 8;47(D1):D649-D659
pubmed: 30357420
Nucleic Acids Res. 2019 Jan 8;47(D1):D666-D677
pubmed: 30289528
BMC Biotechnol. 2011 Oct 13;11:94
pubmed: 21995752
J Bacteriol. 2014 Jun;196(12):2210-5
pubmed: 24706738
Microbiol Res. 2014 Feb-Mar;169(2-3):213-20
pubmed: 23838121
FEMS Microbiol Lett. 2017 Jul 3;364(12):
pubmed: 28591829
Appl Environ Microbiol. 2012 Nov;78(21):7760-8
pubmed: 22941073
PLoS One. 2010 Mar 10;5(3):e9490
pubmed: 20224823
PLoS Genet. 2012;8(11):e1002990
pubmed: 23166503
Int J Syst Evol Microbiol. 2018 Jan;68(1):461-466
pubmed: 29292687
Nat Methods. 2013 Jun;10(6):563-9
pubmed: 23644548
Int J Biol Macromol. 2018 Jan;106:1107-1114
pubmed: 28847603
Front Microbiol. 2021 Jun 11;12:668644
pubmed: 34177846
Nat Biotechnol. 2018 Jul 6;36(7):566-569
pubmed: 29979655
PLoS One. 2012;7(7):e40354
pubmed: 22815743
mBio. 2019 Mar 19;10(2):
pubmed: 30890610
Appl Environ Microbiol. 2009 Aug;75(16):5195-201
pubmed: 19542348
Syst Appl Microbiol. 2010 Jan;33(1):25-34
pubmed: 19962263
Front Microbiol. 2013 Sep 19;4:280
pubmed: 24065962
Science. 2009 Jan 2;323(5910):133-8
pubmed: 19023044
J Bacteriol. 2004 Nov;186(21):7196-204
pubmed: 15489430
Biosci Biotechnol Biochem. 2006 Sep;70(9):2316-9
pubmed: 16960359
Bioinformatics. 2018 Jul 15;34(14):2371-2375
pubmed: 29506021