GWAS Case Studies in Wheat.

Genome-Wide Association Study Haplotypes Phenotype Quantitative Trait Loci Triticum / genetics
Eigen-GWAS Environmental GWAS Epistatic interactions Haplotypes MetaGWAS Multilocus GWAS

Journal

Methods in molecular biology (Clifton, N.J.)
ISSN: 1940-6029
Titre abrégé: Methods Mol Biol
Pays: United States
ID NLM: 9214969

Informations de publication

Date de publication:
2022
Historique:
entrez: 31 5 2022
pubmed: 1 6 2022
medline: 3 6 2022
Statut: ppublish

Résumé

With the advancements in next-generation sequencing technologies, leading to millions of single nucleotide polymorphisms in all crop species including wheat, genome-wide association study (GWAS) has become a leading approach for trait dissection. In wheat, GWAS has been conducted for a plethora of traits and more and more studies are being conducted and reported in journals. While application of GWAS has become a routine in wheat using the standardized approaches, there has been a great leap forward using newer models and combination of GWAS with other sets of data. This chapter has reviewed all these latest advancements in GWAS in wheat by citing the most important studies and their outputs. Specially, we have focused on studies that conducted meta-GWAS, multilocus GWAS, haplotype-based GWAS, Environmental- and Eigen-GWAS, and/or GWAS combined with gene regulatory network and pathway analyses or epistatic interactions analyses; all these have taken the association mapping approach to new heights in wheat.

Identifiants

DOI: 10.1007/978-1-0716-2237-7_19 PMID: 35641773
pubmed: 35641773
doi: 10.1007/978-1-0716-2237-7_19
doi:

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

341-351

Informations de copyright

© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

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Auteurs

Deepmala Sehgal (D)

International Maize and Wheat Improvement Center (CIMMYT), Carretera Mex-Veracruz, Texcoco, CP, Mexico. d.sehgal@cgiar.org.

Susanne Dreisigacker (S)

International Maize and Wheat Improvement Center (CIMMYT), Carretera Mex-Veracruz, Texcoco, CP, Mexico. s.dreisigacker@cgiar.org.

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Classifications MeSH

questionsmedicales.fr › Environnement et santé publique › Santé publique › Méthodes épidémiologiques › Épidémiologie moléculaire › Étude d'association pangénomique › GWAS Case Studies in Wheat.
questionsmedicales.fr › Phénomènes génétiques › Génotype › Haplotypes › GWAS Case Studies in Wheat.
questionsmedicales.fr › Phénomènes génétiques › Phénotype › GWAS Case Studies in Wheat.
questionsmedicales.fr › Phénomènes génétiques › Structures génétiques › Génome › Composants de génome › Locus génétiques › Locus de caractère quantitatif › GWAS Case Studies in Wheat.
questionsmedicales.fr › Eucaryotes › Viridiplantae › Streptophyta › Embryophyta › Tracheobionta › Magnoliopsida › Poaceae › Triticum › GWAS Case Studies in Wheat.