Structural insights into the role of the WW2 domain on tandem WW-PPxY motif interactions of oxidoreductase WWOX.

NMR WW domains WWOX binding of tandem motifs binding via tandem domains computer modeling isothermal titration calorimetry peptide docking protein dynamic protein–protein interaction

Journal

The Journal of biological chemistry
ISSN: 1083-351X
Titre abrégé: J Biol Chem
Pays: United States
ID NLM: 2985121R

Informations de publication

Date de publication:
08 2022
Historique:
received: 01 12 2021
revised: 07 06 2022
accepted: 13 06 2022
pubmed: 19 6 2022
medline: 9 9 2022
entrez: 18 6 2022
Statut: ppublish

Résumé

Class I WW domains are present in many proteins of various functions and mediate protein interactions by binding to short linear PPxY motifs. Tandem WW domains often bind peptides with multiple PPxY motifs, but the interplay of WW-peptide interactions is not always intuitive. The WW domain-containing oxidoreductase (WWOX) harbors two WW domains: an unstable WW1 capable of PPxY binding and stable WW2 that cannot bind PPxY. The WW2 domain has been suggested to act as a WW1 domain chaperone, but the underlying mechanism of its chaperone activity remains to be revealed. Here, we combined NMR, isothermal calorimetry, and structural modeling to elucidate the roles of both WW domains in WWOX binding to its PPxY-containing substrate ErbB4. Using NMR, we identified an interaction surface between these two domains that supports a WWOX conformation compatible with peptide substrate binding. Isothermal calorimetry and NMR measurements also indicated that while binding affinity to a single PPxY motif is marginally increased in the presence of WW2, affinity to a dual-motif peptide increases 10-fold. Furthermore, we found WW2 can directly bind double-motif peptides using its canonical binding site. Finally, differential binding of peptides in mutagenesis experiments was consistent with a parallel N- to C-terminal PPxY tandem motif orientation in binding to the WW1-WW2 tandem domain, validating structural models of the interaction. Taken together, our results reveal the complex nature of tandem WW-domain organization and substrate binding, highlighting the contribution of WWOX WW2 to both protein stability and target binding.

Identifiants

pubmed: 35716775
pii: S0021-9258(22)00587-7
doi: 10.1016/j.jbc.2022.102145
pmc: PMC9293652
pii:
doi:

Substances chimiques

Peptides 0
WW Domain-Containing Oxidoreductase EC 1.1.1.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

102145

Informations de copyright

Copyright © 2022 The Authors. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Conflict of interest The authors declare that they have no conflicts of interest with the contents of this article.

Auteurs

Shahar Rotem-Bamberger (S)

Department of Microbiology and Molecular Genetics, Faculty of Medicine, Institute of Medical Research Israel-Canada, The Hebrew University of Jerusalem, Jerusalem, Israel.

Jamal Fahoum (J)

Department of Microbiology and Molecular Genetics, Faculty of Medicine, Institute of Medical Research Israel-Canada, The Hebrew University of Jerusalem, Jerusalem, Israel.

Keren Keinan-Adamsky (K)

Department of Chemistry, Bar Ilan University, Ramat Gan, Israel.

Tomer Tsaban (T)

Department of Microbiology and Molecular Genetics, Faculty of Medicine, Institute of Medical Research Israel-Canada, The Hebrew University of Jerusalem, Jerusalem, Israel.

Orly Avraham (O)

Department of Microbiology and Molecular Genetics, Faculty of Medicine, Institute of Medical Research Israel-Canada, The Hebrew University of Jerusalem, Jerusalem, Israel.

Deborah E Shalev (DE)

Wolfson Centre for Applied Structural Biology, Hebrew University of Jerusalem, Jerusalem, Israel; Department of Pharmaceutical Engineering, Azrieli College of Engineering, Jerusalem, Israel.

Jordan H Chill (JH)

Department of Chemistry, Bar Ilan University, Ramat Gan, Israel. Electronic address: Jordan.Chill@biu.ac.il.

Ora Schueler-Furman (O)

Department of Microbiology and Molecular Genetics, Faculty of Medicine, Institute of Medical Research Israel-Canada, The Hebrew University of Jerusalem, Jerusalem, Israel. Electronic address: Ora.furman-schueler@mail.huji.ac.il.

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