Pathway Dependence of the Formation and Development of Prefibrillar Aggregates in Insulin B Chain.

amyloid insulin B chain nucleation prefibrillar aggregates protofibrils

Journal

Molecules (Basel, Switzerland)
ISSN: 1420-3049
Titre abrégé: Molecules
Pays: Switzerland
ID NLM: 100964009

Informations de publication

Date de publication:
21 Jun 2022
Historique:
received: 30 05 2022
revised: 18 06 2022
accepted: 19 06 2022
entrez: 9 7 2022
pubmed: 10 7 2022
medline: 14 7 2022
Statut: epublish

Résumé

Amyloid fibrils have been an important subject as they are involved in the development of many amyloidoses and neurodegenerative diseases. The formation of amyloid fibrils is typically initiated by nucleation, whereas its exact mechanisms are largely unknown. With this situation, we have previously identified prefibrillar aggregates in the formation of insulin B chain amyloid fibrils, which have provided an insight into the mechanisms of protein assembly involved in nucleation. Here, we have investigated the formation of insulin B chain amyloid fibrils under different pH conditions to better understand amyloid nucleation mediated by prefibrillar aggregates. The B chain showed strong propensity to form amyloid fibrils over a wide pH range, and prefibrillar aggregates were formed under all examined conditions. In particular, different structures of amyloid fibrils were found at pH 5.2 and pH 8.7, making it possible to compare different pathways. Detailed investigations at pH 5.2 in comparison with those at pH 8.7 have suggested that the evolution of protofibril-like aggregates is a common mechanism. In addition, different processes of evolution of the prefibrillar aggregates have also been identified, suggesting that the nucleation processes diversify depending on the polymorphism of amyloid fibrils.

Identifiants

pubmed: 35807211
pii: molecules27133964
doi: 10.3390/molecules27133964
pmc: PMC9268647
pii:
doi:

Substances chimiques

Amyloid 0
Amyloidogenic Proteins 0
Insulin 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Japan Society for the Promotion of Science
ID : JP17H06352
Organisme : Japan Society for the Promotion of Science
ID : JP20H03224
Organisme : Japan Society for the Promotion of Science
ID : JP20K21396
Organisme : Japan Society for the Promotion of Science
ID : JP19KK0071
Organisme : Japan Society for the Promotion of Science
ID : JP20K06579
Organisme : Japan Society for the Promotion of Science
ID : JP19K16088
Organisme : Japan Society for the Promotion of Science
ID : JP21K15051
Organisme : Japan Society for the Promotion of Science
ID : JP18H05229
Organisme : Japan Society for the Promotion of Science
ID : JP18H05534
Organisme : Japan Society for the Promotion of Science
ID : JP18H03681

Références

Sci Rep. 2018 Jan 8;8(1):62
pubmed: 29311640
Nature. 2017 Jul 13;547(7662):185-190
pubmed: 28678775
Science. 2012 Mar 9;335(6073):1228-31
pubmed: 22403391
J Chem Phys. 2016 Jul 21;145(3):035102
pubmed: 27448906
Acc Chem Res. 2009 May 19;42(5):621-9
pubmed: 19402623
Amyloid. 2020 Dec;27(4):217-222
pubmed: 33100054
Nature. 2016 Nov 09;539(7628):227-235
pubmed: 27830791
J Phys Chem B. 2013 Apr 18;117(15):4003-13
pubmed: 23537140
Biochemistry. 2019 Jun 18;58(24):2769-2781
pubmed: 31135143
Nature. 2003 Dec 18;426(6968):884-90
pubmed: 14685248
Int J Mol Sci. 2021 Apr 21;22(9):
pubmed: 33919421
J Am Chem Soc. 2021 Aug 4;143(30):11473-11481
pubmed: 34286587
Nat Rev Mol Cell Biol. 2018 Dec;19(12):755-773
pubmed: 30237470
Adv Protein Chem. 1986;38:181-364
pubmed: 3541539
Neuron. 2015 May 6;86(3):632-45
pubmed: 25950632
Biochim Biophys Acta. 1964 Jan 27;79:76-87
pubmed: 14114531
Proc Natl Acad Sci U S A. 2016 Jan 12;113(2):E127-36
pubmed: 26712030
Phys Chem Chem Phys. 2015 Mar 28;17(12):7606-18
pubmed: 25719972
J Biol Chem. 2014 Apr 11;289(15):10399-10410
pubmed: 24569992
Curr Opin Struct Biol. 2016 Feb;36:32-9
pubmed: 26774801
Annu Rev Phys Chem. 2018 Apr 20;69:273-298
pubmed: 29490200
Annu Rev Biochem. 2017 Jun 20;86:27-68
pubmed: 28498720
Curr Opin Chem Biol. 2021 Oct;64:106-115
pubmed: 34229162
Chem Commun (Camb). 2018 Aug 2;54(63):8667-8684
pubmed: 29978862
J Am Chem Soc. 2014 Oct 29;136(43):15146-9
pubmed: 25313920
Biophys Rev. 2018 Apr;10(2):527-534
pubmed: 29214606
FEBS Lett. 2009 Aug 20;583(16):2600-9
pubmed: 19481541
Biochemistry. 2006 Aug 1;45(30):9342-53
pubmed: 16866381
Biomacromolecules. 2015 Jan 12;16(1):326-35
pubmed: 25469942
Methods Enzymol. 1999;309:256-74
pubmed: 10507029
Science. 2000 Aug 25;289(5483):1317-21
pubmed: 10958771
Proc Natl Acad Sci U S A. 2016 Oct 18;113(42):11835-11840
pubmed: 27698130
J Biol Chem. 2021 Jan-Jun;296:100049
pubmed: 33168631
Angew Chem Int Ed Engl. 2021 Feb 8;60(6):3016-3021
pubmed: 33095508
Nat Chem. 2011 Feb;3(2):172-7
pubmed: 21258392

Auteurs

Yuki Yoshikawa (Y)

Graduate School of Science, Kobe University, 1-1 Rokkodai, Nada, Kobe 657-8501, Hyogo, Japan.

Keisuke Yuzu (K)

Graduate School of Science, Kobe University, 1-1 Rokkodai, Nada, Kobe 657-8501, Hyogo, Japan.

Naoki Yamamoto (N)

Division of Biophysics, Physiology, School of Medicine, Jichi Medical University, 3311-1 Yakushiji, Shimotsuke 329-0498, Tochigi, Japan.

Ken Morishima (K)

Institute for Integrated Radiation and Nuclear Science, Kyoto University, 2 Asashiro-Nishi, Kumatori, Sennan-gun 590-0494, Osaka, Japan.

Rintaro Inoue (R)

Institute for Integrated Radiation and Nuclear Science, Kyoto University, 2 Asashiro-Nishi, Kumatori, Sennan-gun 590-0494, Osaka, Japan.

Masaaki Sugiyama (M)

Institute for Integrated Radiation and Nuclear Science, Kyoto University, 2 Asashiro-Nishi, Kumatori, Sennan-gun 590-0494, Osaka, Japan.

Tetsushi Iwasaki (T)

Graduate School of Science, Kobe University, 1-1 Rokkodai, Nada, Kobe 657-8501, Hyogo, Japan.
Biosignal Research Center, Kobe University, 1-1 Rokkodai, Nada, Kobe 657-8501, Hyogo, Japan.

Masatomo So (M)

Institute for Protein Research, Osaka University, 3-2 Yamadaoka, Suita 565-0871, Osaka, Japan.

Yuji Goto (Y)

Global Center for Medical Engineering and Informatics, Osaka University, 2-1 Yamadaoka, Suita 565-0871, Osaka, Japan.

Atsuo Tamura (A)

Graduate School of Science, Kobe University, 1-1 Rokkodai, Nada, Kobe 657-8501, Hyogo, Japan.

Eri Chatani (E)

Graduate School of Science, Kobe University, 1-1 Rokkodai, Nada, Kobe 657-8501, Hyogo, Japan.

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Classifications MeSH