Proteomic Analysis of Methanococcus voltae Grown in the Presence of Mineral and Nonmineral Sources of Iron and Sulfur.
iron-sulfur cluster
mackinawite
methanogen
proteomics
pyrite
Journal
Microbiology spectrum
ISSN: 2165-0497
Titre abrégé: Microbiol Spectr
Pays: United States
ID NLM: 101634614
Informations de publication
Date de publication:
31 08 2022
31 08 2022
Historique:
pubmed:
26
7
2022
medline:
9
9
2022
entrez:
25
7
2022
Statut:
ppublish
Résumé
Iron sulfur (Fe-S) proteins are essential and ubiquitous across all domains of life, yet the mechanisms underpinning assimilation of iron (Fe) and sulfur (S) and biogenesis of Fe-S clusters are poorly understood. This is particularly true for anaerobic methanogenic archaea, which are known to employ more Fe-S proteins than other prokaryotes. Here, we utilized a deep proteomics analysis of Methanococcus voltae A3 cultured in the presence of either synthetic pyrite (FeS
Identifiants
pubmed: 35876569
doi: 10.1128/spectrum.01893-22
pmc: PMC9431491
doi:
Substances chimiques
Iron-Sulfur Proteins
0
Minerals
0
Sulfur
70FD1KFU70
Iron
E1UOL152H7
Types de publication
Journal Article
Research Support, N.I.H., Extramural
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0189322Références
Crit Rev Biochem Mol Biol. 2008 Jan-Feb;43(1):63-88
pubmed: 18307109
Protein Eng Des Sel. 2009 Jan;22(1):27-35
pubmed: 18988691
J Bacteriol. 2021 Aug 9;203(17):e0011721
pubmed: 34124941
PLoS One. 2009 Sep 16;4(9):e6964
pubmed: 19759909
Biochemistry. 2014 Sep 23;53(37):5834-47
pubmed: 25153801
Biochim Biophys Acta. 2015 Jun;1853(6):1350-69
pubmed: 25461840
Curr Opin Microbiol. 2001 Apr;4(2):172-7
pubmed: 11282473
Annu Rev Microbiol. 2010;64:453-73
pubmed: 20528692
Nucleic Acids Res. 2022 Jul 5;50(W1):W216-W221
pubmed: 35325185
Bioinformatics. 2010 Jul 1;26(13):1608-15
pubmed: 20472543
Nat Biotechnol. 2012 Oct;30(10):918-20
pubmed: 23051804
J Proteome Res. 2012 Feb 3;11(2):1420-32
pubmed: 22217245
Nat Commun. 2020 Mar 25;11(1):1548
pubmed: 32214105
Nat Protoc. 2015 Jun;10(6):845-58
pubmed: 25950237
Proc Natl Acad Sci U S A. 2018 Jun 26;115(26):6840-6845
pubmed: 29891657
Mol Microbiol. 2006 Feb;59(3):795-806
pubmed: 16420352
Proc Natl Acad Sci U S A. 2020 Aug 11;117(32):19487-19496
pubmed: 32723820
Chem Rev. 2009 Oct;109(10):4580-95
pubmed: 19772347
Nat Protoc. 2009;4(1):44-57
pubmed: 19131956
Proc Natl Acad Sci U S A. 2014 Sep 23;111(38):E3948-56
pubmed: 25157147
J Bacteriol. 2013 May;195(10):2400-7
pubmed: 23504018
Nat Commun. 2018 Jul 19;9(1):2824
pubmed: 30026506
Infect Immun. 2012 Jun;80(6):1948-57
pubmed: 22409932
J Biol Chem. 2007 Oct 19;282(42):30442-51
pubmed: 17642475
J Biol Chem. 2010 Oct 15;285(42):31923-9
pubmed: 20709756
Proc Natl Acad Sci U S A. 2009 Mar 24;106(12):4677-82
pubmed: 19264958
Nat Rev Microbiol. 2008 Aug;6(8):579-91
pubmed: 18587410
Front Microbiol. 2022 May 09;13:878387
pubmed: 35615515
Mol Microbiol. 2003 Apr;48(2):495-506
pubmed: 12675807
Mikrochim Acta. 2018 Jun 26;185(7):337
pubmed: 29946767
Crit Rev Biochem Mol Biol. 1992;27(6):473-503
pubmed: 1473352
Emerg Top Life Sci. 2018 Dec 14;2(4):629-646
pubmed: 33525834
J Proteome Res. 2008 Jan;7(1):29-34
pubmed: 18067246
Biochemistry. 2011 Jan 18;50(2):194-206
pubmed: 21090815
Extremophiles. 2014 Sep;18(5):925-36
pubmed: 25116054
FEMS Microbiol Rev. 2016 Mar;40(2):273-98
pubmed: 26684538
Nat Methods. 2007 Nov;4(11):923-5
pubmed: 17952086
J Biol Chem. 2006 Aug 11;281(32):22464-70
pubmed: 16766528
J Mol Biol. 2004 Nov 12;344(1):155-67
pubmed: 15504408
Nucleic Acids Res. 2017 Jan 4;45(D1):D158-D169
pubmed: 27899622
J Biol Chem. 2008 Jul 4;283(27):18861-72
pubmed: 18400755
Proc Natl Acad Sci U S A. 2019 Mar 12;116(11):5037-5044
pubmed: 30814220
Nat Commun. 2017 Jul 20;8:16110
pubmed: 28726794
Trends Microbiol. 2012 May;20(5):251-8
pubmed: 22406173
J Bacteriol. 2021 Sep 8;203(19):e0014621
pubmed: 34251867
Nucleic Acids Res. 2014 Jan;42(Database issue):D222-30
pubmed: 24288371
J Biol Chem. 2015 Feb 13;290(7):3964-71
pubmed: 25477505
Acta Biochim Pol. 2006;53(4):685-91
pubmed: 17143336
J Biol Chem. 2015 Feb 13;290(7):3987-94
pubmed: 25477518
Methods Enzymol. 2018;606:1-71
pubmed: 30097089
Curr Opin Genet Dev. 1997 Jun;7(3):386-91
pubmed: 9229115
Environ Microbiol. 2019 Nov;21(11):4180-4195
pubmed: 31397054
Chem Rev. 2014 Apr 23;114(8):4229-317
pubmed: 24476342
Structure. 2004 Sep;12(9):1729-40
pubmed: 15341736
Annu Rev Biochem. 2006;75:681-706
pubmed: 16756507
PLoS One. 2015 May 01;10(5):e0125325
pubmed: 25933432
J Bacteriol. 1982 Mar;149(3):852-63
pubmed: 6801012
Sci Rep. 2017 Jul 14;7(1):5495
pubmed: 28710385
J Bacteriol. 2016 Jun 27;198(14):1974-83
pubmed: 27137504
Nat Commun. 2019 Feb 7;10(1):625
pubmed: 30733442
J Bacteriol. 2010 Jan;192(2):595-8
pubmed: 19897660
Nat Methods. 2019 Jun;16(6):509-518
pubmed: 31133760
Nature. 2017 Mar 2;543(7643):78-82
pubmed: 28225763
Science. 1997 Aug 1;277(5326):653-9
pubmed: 9235882
ISME J. 2021 Dec;15(12):3498-3507
pubmed: 34112969
Microbiology (Reading). 1998 Jul;144 ( Pt 7):1881-1894
pubmed: 9695921
Proc Natl Acad Sci U S A. 2012 Sep 18;109(38):15473-8
pubmed: 22872868
J Am Chem Soc. 2020 Jan 29;142(4):1911-1924
pubmed: 31899624
Bioinformatics. 2008 Aug 15;24(16):i42-8
pubmed: 18689838
Nucleic Acids Res. 2000 Jan 1;28(1):27-30
pubmed: 10592173
Curr Biol. 2018 Jul 9;28(13):R727-R732
pubmed: 29990451
Sci Total Environ. 2021 Jul 15;778:146085
pubmed: 33714092
J Biol Chem. 2003 Aug 8;278(32):29502-8
pubmed: 12761216
Philos Trans A Math Phys Eng Sci. 2020 Feb 21;378(2165):20190151
pubmed: 31902344
Cell Rep. 2012 Aug 30;2(2):419-31
pubmed: 22902405
J Mol Biol. 1990 Oct 5;215(3):403-10
pubmed: 2231712
Nucleic Acids Res. 2015 Jul 1;43(W1):W251-7
pubmed: 25897128
Archaea. 2010 Dec 13;2010:175050
pubmed: 21197080