Genomic evidence for global ocean plankton biogeography shaped by large-scale current systems.
ecology
genetics
genomics
metabarcoding
metagenomics
microbial oceanography
plankton biogeography
Journal
eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614
Informations de publication
Date de publication:
03 08 2022
03 08 2022
Historique:
received:
23
02
2022
accepted:
06
06
2022
entrez:
3
8
2022
pubmed:
4
8
2022
medline:
6
8
2022
Statut:
epublish
Résumé
Biogeographical studies have traditionally focused on readily visible organisms, but recent technological advances are enabling analyses of the large-scale distribution of microscopic organisms, whose biogeographical patterns have long been debated. Here we assessed the global structure of plankton geography and its relation to the biological, chemical, and physical context of the ocean (the 'seascape') by analyzing metagenomes of plankton communities sampled across oceans during the Oceans are brimming with life invisible to our eyes, a myriad of species of bacteria, viruses and other microscopic organisms essential for the health of the planet. These ‘marine plankton’ are unable to swim against currents and should therefore be constantly on the move, yet previous studies have suggested that distinct species of plankton may in fact inhabit different oceanic regions. However, proving this theory has been challenging; collecting plankton is logistically difficult, and it is often impossible to distinguish between species simply by examining them under a microscope. However, within the last decade, a research schooner called
Autres résumés
Type: plain-language-summary
(eng)
Oceans are brimming with life invisible to our eyes, a myriad of species of bacteria, viruses and other microscopic organisms essential for the health of the planet. These ‘marine plankton’ are unable to swim against currents and should therefore be constantly on the move, yet previous studies have suggested that distinct species of plankton may in fact inhabit different oceanic regions. However, proving this theory has been challenging; collecting plankton is logistically difficult, and it is often impossible to distinguish between species simply by examining them under a microscope. However, within the last decade, a research schooner called
Identifiants
pubmed: 35920817
doi: 10.7554/eLife.78129
pii: 78129
pmc: PMC9348854
doi:
pii:
Banques de données
SRA
['PRJEB16766', 'PRJEB4352', 'PRJEB1787', 'PRJEB4419']
figshare
['10.6084/m9.figshare.11303177']
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, U.S. Gov't, Non-P.H.S.
Langues
eng
Sous-ensembles de citation
IM
Investigateurs
Silvia G Acinas
(SG)
Peer Bork
(P)
Emmanuel Boss
(E)
Chris Bowler
(C)
Guy Cochrane
(G)
Colomban de Vargas
(C)
Gabriel Gorsky
(G)
Nigel Grimsley
(N)
Lionel Guidi
(L)
Pascal Hingamp
(P)
Daniele Iudicone
(D)
Olivier Jaillon
(O)
Stefanie Kandels
(S)
Lee Karp-Boss
(L)
Eric Karsenti
(E)
Fabrice Not
(F)
Hiroyuki Ogata
(H)
Stéphane Pesant
(S)
Jeroen Raes
(J)
Christian Sardet
(C)
Mike Sieracki
(M)
Sabrina Speich
(S)
Lars Stemmann
(L)
Matthew B Sullivan
(MB)
Shinichi Sunagawa
(S)
Patrick Wincker
(P)
Informations de copyright
© 2022, Richter, Watteaux, Vannier et al.
Déclaration de conflit d'intérêts
DR, RW, TV, JL, PF, GR, NM, NH, GB, OD, TD, AF, SS, RN, CB, DE, FG, LG, KL, EM, JP, SR, SR, CD, SK, MP, SS, SP, JA, JB, CL, EP, PB, SS, FL, LK, CB, MS, EK, MM, IP, PP, PW, Cd, MR, DI, OJ No competing interests declared
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