Characterizing phenotypic diversity of trehalose biosynthesis mutants in multiple wild strains of Saccharomyces cerevisiae.

Saccharomyces cerevisiae TPS1 TPS2 TPS3 TSL1 tps1 catalytically inactive alleles genetic heterogeneity trehalose biosynthesis

Journal

G3 (Bethesda, Md.)
ISSN: 2160-1836
Titre abrégé: G3 (Bethesda)
Pays: England
ID NLM: 101566598

Informations de publication

Date de publication:
04 11 2022
Historique:
accepted: 18 07 2022
received: 08 04 2022
pubmed: 6 8 2022
medline: 9 11 2022
entrez: 5 8 2022
Statut: ppublish

Résumé

In the yeast Saccharomyces cerevisiae, trehalose-6-phospahte synthase (Tps1) and trehalose-6-phosphate phosphatase (Tps2) are the main proteins catalyzing intracellular trehalose production. In addition to Tps1 and Tps2, 2 putative regulatory proteins with less clearly defined roles also appear to be involved with trehalose production, Tps3 and Tsl1. While this pathway has been extensively studied in laboratory strains of S. cerevisiae, we sought to examine the phenotypic consequences of disrupting these genes in wild strains. Here we deleted the TPS1, TPS2, TPS3, and TSL1 genes in 4 wild strains and 1 laboratory strain for comparison. Although some tested phenotypes were not shared between all strains, deletion of TPS1 abolished intracellular trehalose, caused inability to grow on fermentable carbon sources and resulted in severe sporulation deficiency for all 5 strains. After examining tps1 mutant strains expressing catalytically inactive variants of Tps1, our results indicate that Tps1, independent of trehalose production, is a key component for yeast survival in response to heat stress, for regulating sporulation, and growth on fermentable sugars. All tps2Δ mutants exhibited growth impairment on nonfermentable carbon sources, whereas variations were observed in trehalose synthesis, thermosensitivity and sporulation efficiency. tps3Δ and tsl1Δ mutants exhibited mild or no phenotypic disparity from their isogenic wild type although double mutants tps3Δ tsl1Δ decreased the amount of intracellular trehalose production in all 5 strains by 17-45%. Altogether, we evaluated, confirmed, and expanded the phenotypic characteristics associated trehalose biosynthesis mutants. We also identified natural phenotypic variants in multiple strains that could be used to genetically dissect the basis of these traits and then develop mechanistic models connecting trehalose metabolism to diverse cellular processes.

Identifiants

pubmed: 35929793
pii: 6656353
doi: 10.1093/g3journal/jkac196
pmc: PMC9635654
pii:
doi:

Substances chimiques

Trehalose B8WCK70T7I
Glucosyltransferases EC 2.4.1.-
Carbon 7440-44-0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Informations de copyright

© The Author(s) 2022. Published by Oxford University Press on behalf of Genetics Society of America.

Références

Biochem Mol Biol Int. 1996 Feb;38(2):259-65
pubmed: 8850521
Mol Cell. 1998 Apr;1(5):639-48
pubmed: 9660948
PLoS One. 2020 May 29;15(5):e0233779
pubmed: 32470059
Eur J Biochem. 1993 Sep 15;216(3):849-61
pubmed: 8404905
mBio. 2020 Oct 27;11(5):
pubmed: 33109759
J Bacteriol. 1987 Dec;169(12):5518-22
pubmed: 2960663
Adv Exp Med Biol. 2007;594:143-58
pubmed: 17205682
Mol Microbiol. 1996 Jun;20(5):981-91
pubmed: 8809751
Mol Biol Cell. 2010 Jun 15;21(12):1982-90
pubmed: 20427572
FEMS Yeast Res. 2016 Jun;16(4):
pubmed: 27189362
FEMS Yeast Res. 2004 Jan;4(4-5):351-9
pubmed: 14734015
FEMS Microbiol Lett. 1993 Mar 1;107(2-3):251-3
pubmed: 8472906
Eur J Biochem. 1989 Jul 1;182(3):613-20
pubmed: 2546763
J Biol Chem. 1998 Dec 11;273(50):33311-9
pubmed: 9837904
Genome Res. 2005 Oct;15(10):1456-61
pubmed: 16169922
Curr Genet. 1994 Oct;26(4):295-301
pubmed: 7882422
Microbiology (Reading). 1997 Jun;143 ( Pt 6):1891-1900
pubmed: 9202465
Anal Biochem. 1997 May 15;248(1):186-8
pubmed: 9177741
G3 (Bethesda). 2016 Apr 07;6(4):957-71
pubmed: 26869621
Nature. 2003 May 15;423(6937):241-54
pubmed: 12748633
Nat Commun. 2017 Oct 13;8(1):922
pubmed: 29030545
Glycobiology. 2003 Apr;13(4):17R-27R
pubmed: 12626396
Trends Genet. 2013 May;29(5):309-17
pubmed: 23395329
Mol Microbiol. 1993 May;8(5):927-43
pubmed: 8355617
Genetics. 2011 Nov;189(3):695-704
pubmed: 22084421
EMBO J. 1995 Apr 3;14(7):1360-71
pubmed: 7729414
Gene. 1995 Apr 14;156(1):119-22
pubmed: 7737504
Genetics. 2003 Jan;163(1):47-54
pubmed: 12586695
Biochem J. 2000 Aug 15;350 Pt 1:261-8
pubmed: 10926852
Genetics. 2014 Jun;197(2):451-65
pubmed: 24939991
Curr Genet. 1995 Jan;27(2):110-22
pubmed: 7788713
Mol Biol Cell. 2018 Apr 15;29(8):897-910
pubmed: 29444955
Trends Biochem Sci. 1995 Jan;20(1):3-10
pubmed: 7878741
Proc Natl Acad Sci U S A. 2015 May 12;112(19):6122-7
pubmed: 25918381
J Biosci Bioeng. 2010 Mar;109(3):262-6
pubmed: 20159575
FEBS Lett. 1993 Aug 23;329(1-2):51-4
pubmed: 8354408
BMC Genomics. 2005 Apr 16;6:53
pubmed: 15833139
Genetics. 1994 Feb;136(2):485-503
pubmed: 8150278
Microb Cell. 2018 Oct 01;5(10):444-459
pubmed: 30386789
J Bacteriol. 1992 Jun;174(12):4183-8
pubmed: 1597433
EMBO J. 2007 Aug 8;26(15):3673-85
pubmed: 17641690
Cryobiology. 1993 Dec;30(6):591-6
pubmed: 8306706
Biochem J. 2013 Sep 1;454(2):227-37
pubmed: 23763276
Microb Biotechnol. 2013 Sep;6(5):493-502
pubmed: 23302511
Science. 2014 Feb 28;343(6174):1245114
pubmed: 24436182
Yeast. 2020 Mar;37(3):269-279
pubmed: 31960994
Mol Gen Genet. 1996 Sep 25;252(4):470-82
pubmed: 8879249
FEBS Lett. 1994 Aug 22;350(2-3):266-70
pubmed: 8070577
Nature. 2018 Apr;556(7701):339-344
pubmed: 29643504
Mol Microbiol. 1997 May;24(4):687-95
pubmed: 9194697
FEMS Yeast Res. 2006 Sep;6(6):902-13
pubmed: 16911512
Biochim Biophys Acta. 2014 Jun;1840(6):1646-50
pubmed: 24380875
Genetics. 1986 May;113(1):35-43
pubmed: 3519363
Curr Genet. 1987;11(6-7):459-65
pubmed: 2967122
Eur J Biochem. 1993 Sep 15;216(3):841-8
pubmed: 8404904
Biochim Biophys Acta. 2006 Mar;1760(3):340-6
pubmed: 16510250
G3 (Bethesda). 2014 Mar 20;4(3):389-98
pubmed: 24374639
Genetics. 2014 May;197(1):33-48
pubmed: 24807111
Biochemistry. 1979 Oct 16;18(21):4487-99
pubmed: 40590
Mol Microbiol. 2001 Jun;40(6):1345-56
pubmed: 11442833
Nature. 2009 Mar 19;458(7236):337-41
pubmed: 19212322
Trends Biotechnol. 1998 Nov;16(11):460-8
pubmed: 9830154
FEMS Microbiol Rev. 2001 Jan;25(1):125-45
pubmed: 11152943
FEMS Yeast Res. 2004 Sep;4(8):773-87
pubmed: 15450184
Proc Natl Acad Sci U S A. 2015 May 12;112(19):6116-21
pubmed: 25918382
Science. 1996 Oct 25;274(5287):546, 563-7
pubmed: 8849441
Biochim Biophys Acta. 2003 Sep 30;1606(1-3):83-93
pubmed: 14507429
Yeast. 1992 Mar;8(3):183-92
pubmed: 1315471
Cell. 2016 Sep 8;166(6):1397-1410.e16
pubmed: 27610566
Eur J Biochem. 1993 Mar 1;212(2):315-23
pubmed: 8444170
Eur J Biochem. 1992 Nov 1;209(3):951-9
pubmed: 1425702
Genetics. 1989 May;122(1):19-27
pubmed: 2659436
Yeast. 1998 Jan 30;14(2):115-32
pubmed: 9483801
Nat Genet. 2006 Sep;38(9):1077-81
pubmed: 16892060
FEBS Lett. 1989 Sep 25;255(2):431-4
pubmed: 2676607
Genetics. 2011 Oct;189(2):507-19
pubmed: 21840858
J Theor Biol. 2003 Jul 7;223(1):55-78
pubmed: 12782117
BMC Genomics. 2003 Nov 13;4(1):45
pubmed: 14614785
Genetics. 1996 Nov;144(3):923-33
pubmed: 8913738
Yeast. 1994 Feb;10(2):199-209
pubmed: 8203161
Can J Microbiol. 2016 Oct;62(10):827-835
pubmed: 27510429
Nat Methods. 2009 May;6(5):343-5
pubmed: 19363495
Curr Genet. 1993;23(4):281-9
pubmed: 8467527
Protein Sci. 2009 Jan;18(1):24-36
pubmed: 19177348
Genetics. 2012 Dec;192(4):1523-32
pubmed: 23051644

Auteurs

Anqi Chen (A)

Department of Food Science, Cornell University, Ithaca, NY 14853, USA.

Jeremy Vargas-Smith (J)

Department of Food Science, Cornell University, Ithaca, NY 14853, USA.

Hugo Tapia (H)

Biology Program, California State University-Channel Islands, Camarillo, CA 93012, USA.

Patrick A Gibney (PA)

Department of Food Science, Cornell University, Ithaca, NY 14853, USA.

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