Metabarcoding data reveal vertical multitaxa variation in topsoil communities during the colonization of deglaciated forelands.

Beta-diversity Hill numbers earthworms environmental DNA glacier retreat insects microorganisms soil depth springtails

Journal

Molecular ecology
ISSN: 1365-294X
Titre abrégé: Mol Ecol
Pays: England
ID NLM: 9214478

Informations de publication

Date de publication:
Dec 2023
Historique:
revised: 21 07 2022
received: 23 12 2021
accepted: 15 08 2022
medline: 27 11 2023
pubmed: 24 8 2022
entrez: 23 8 2022
Statut: ppublish

Résumé

Ice-free areas are expanding worldwide due to dramatic glacier shrinkage and are undergoing rapid colonization by multiple lifeforms, thus representing key environments to study ecosystem development. It has been proposed that the colonization dynamics of deglaciated terrains is different between surface and deep soils but that the heterogeneity between communities inhabiting surface and deep soils decreases through time. Nevertheless, tests of this hypothesis remain scarce, and it is unclear whether patterns are consistent among different taxonomic groups. Here, we used environmental DNA metabarcoding to test whether community diversity and composition of six groups (Eukaryota, Bacteria, Mycota, Collembola, Insecta, and Oligochaeta) differ between the surface (0-5 cm) and deeper (7.5-20 cm) soil at different stages of development and across five Alpine glaciers. Taxonomic diversity increased with time since glacier retreat and with soil evolution. The pattern was consistent across groups and soil depths. For Eukaryota and Mycota, alpha-diversity was highest at the surface. Time since glacier retreat explained more variation of community composition than depth. Beta-diversity between surface and deep layers decreased with time since glacier retreat, supporting the hypothesis that the first 20 cm of soil tends to homogenize through time. Several molecular operational taxonomic units of bacteria and fungi were significant indicators of specific depths and/or soil development stages, confirming the strong functional variation of microbial communities through time and depth. The complexity of community patterns highlights the importance of integrating information from multiple taxonomic groups to unravel community variation in response to ongoing global changes.

Identifiants

pubmed: 35997629
doi: 10.1111/mec.16669
doi:

Substances chimiques

Soil 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

6304-6319

Subventions

Organisme : European Research Council
Pays : International

Informations de copyright

© 2022 The Authors. Molecular Ecology published by John Wiley & Sons Ltd.

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Auteurs

Alessia Guerrieri (A)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Alexis Carteron (A)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Aurélie Bonin (A)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.
Argaly, Bâtiment CleanSpace, Sainte-Hélène-du-Lac, France.

Silvio Marta (S)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Roberto Ambrosini (R)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Marco Caccianiga (M)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Isabel Cantera (I)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Chiara Compostella (C)

Department of Earth Sciences, "A. Desio," Università degli Studi di Milano, Milan, Italy.

Guglielmina Diolaiuti (G)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Diego Fontaneto (D)

CNR - Water Research Institute, Verbania, Italy.

Ludovic Gielly (L)

Univ. Grenoble Alpes, CNRS, Univ. Savoie Mont Blanc, LECA, Laboratoire d'Ecologie Alpine, Grenoble, France.

Fabrizio Gili (F)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.

Mauro Gobbi (M)

Research & Museum Collections Office, Climate and Ecology Unit, MUSE-Science Museum, Trento, Italy.

Jerome Poulenard (J)

Univ. Savoie Mont Blanc, CNRS, EDYTEM, Chambéry, France.

Pierre Taberlet (P)

Univ. Grenoble Alpes, CNRS, Univ. Savoie Mont Blanc, LECA, Laboratoire d'Ecologie Alpine, Grenoble, France.
UiT - The Arctic University of Norway, Tromsø Museum, Tromsø, Norway.

Andrea Zerboni (A)

Department of Earth Sciences, "A. Desio," Università degli Studi di Milano, Milan, Italy.

Wilfried Thuiller (W)

Univ. Grenoble Alpes, CNRS, Univ. Savoie Mont Blanc, LECA, Laboratoire d'Ecologie Alpine, Grenoble, France.

Gentile Francesco Ficetola (GF)

Department of Environmental Science and Policy, Università degli Studi di Milano, Milan, Italy.
Univ. Grenoble Alpes, CNRS, Univ. Savoie Mont Blanc, LECA, Laboratoire d'Ecologie Alpine, Grenoble, France.

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