Proteome Turnover Analysis in Haloferax volcanii by a Heavy Isotope Multilabeling Approach.

Haloarchaea Haloferax volcanii Mass spectrometry Metabolic labeling Proteome turnover Proteomics

Journal

Methods in molecular biology (Clifton, N.J.)
ISSN: 1940-6029
Titre abrégé: Methods Mol Biol
Pays: United States
ID NLM: 9214969

Informations de publication

Date de publication:
2022
Historique:
entrez: 20 9 2022
pubmed: 21 9 2022
medline: 24 9 2022
Statut: ppublish

Résumé

The cellular protein repertoire is highly dynamic and responsive to internal or external stimuli. Its changes are largely the consequence of the combination of protein synthesis and degradation, referred collectively as protein turnover. Different proteomics techniques have been developed to determine the whole proteome turnover of a cell, but very few have been applied to archaea. In this chapter we describe a heavy isotope multilabeling method that allowed the successful analysis of relative protein synthesis and degradation rates on the proteome scale of the halophilic archaeon Haloferax volcanii. This method combines

Identifiants

pubmed: 36125756
doi: 10.1007/978-1-0716-2445-6_17
doi:

Substances chimiques

Isotopes 0
Proteome 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

267-286

Informations de copyright

© 2022. The Author(s), under exclusive license to Springer Science+Business Media, LLC, part of Springer Nature.

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Auteurs

Roberto A Paggi (RA)

Instituto de Investigaciones Biológicas, FCEyN, Universidad Nacional de Mar del Plata (UNMDP), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Mar del Plata, Argentina.

Stefan P Albaum (SP)

Bioinformatics Resource Facility, Center for Biotechnology (CeBiTec), Bielefeld University, Bielefeld, Germany.

Ansgar Poetsch (A)

College of Marine Life Sciences, Ocean University of China, Qingdao, China. ansgar.poetsch@rub.de.
Queen Mary School, Medical College, Nanchang University, Nanchang, China. ansgar.poetsch@rub.de.
Plant Biochemistry, Ruhr University Bochum, Bochum, Germany. ansgar.poetsch@rub.de.

Micaela Cerletti (M)

Instituto de Investigaciones Biológicas, FCEyN, Universidad Nacional de Mar del Plata (UNMDP), Consejo Nacional de Investigaciones Científicas y Técnicas (CONICET), Mar del Plata, Argentina. mcerletti@gmail.com.

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