A genome-wide CRISPR screen identifies DPM1 as a modifier of DPAGT1 deficiency and ER stress.


Journal

PLoS genetics
ISSN: 1553-7404
Titre abrégé: PLoS Genet
Pays: United States
ID NLM: 101239074

Informations de publication

Date de publication:
09 2022
Historique:
received: 10 06 2022
accepted: 14 09 2022
revised: 07 10 2022
pubmed: 28 9 2022
medline: 12 10 2022
entrez: 27 9 2022
Statut: epublish

Résumé

Partial loss-of-function mutations in glycosylation pathways underlie a set of rare diseases called Congenital Disorders of Glycosylation (CDGs). In particular, DPAGT1-CDG is caused by mutations in the gene encoding the first step in N-glycosylation, DPAGT1, and this disorder currently lacks effective therapies. To identify potential therapeutic targets for DPAGT1-CDG, we performed CRISPR knockout screens in Drosophila cells for genes associated with better survival and glycoprotein levels under DPAGT1 inhibition. We identified hundreds of candidate genes that may be of therapeutic benefit. Intriguingly, inhibition of the mannosyltransferase Dpm1, or its downstream glycosylation pathways, could rescue two in vivo models of DPAGT1 inhibition and ER stress, even though impairment of these pathways alone usually causes CDGs. While both in vivo models ostensibly cause cellular stress (through DPAGT1 inhibition or a misfolded protein), we found a novel difference in fructose metabolism that may indicate glycolysis as a modulator of DPAGT1-CDG. Our results provide new therapeutic targets for DPAGT1-CDG, include the unique finding of Dpm1-related pathways rescuing DPAGT1 inhibition, and reveal a novel interaction between fructose metabolism and ER stress.

Identifiants

pubmed: 36166480
doi: 10.1371/journal.pgen.1010430
pii: PGENETICS-D-22-00677
pmc: PMC9543880
doi:

Substances chimiques

Glycoproteins 0
Fructose 30237-26-4
Mannosyltransferases EC 2.4.1.-
N-Acetylglucosaminyltransferases EC 2.4.1.-
dolichyl-phosphate alpha-N-acetylglucosaminyltransferase EC 2.4.1.153

Types de publication

Journal Article Research Support, Non-U.S. Gov't Research Support, N.I.H., Extramural

Langues

eng

Sous-ensembles de citation

IM

Pagination

e1010430

Subventions

Organisme : NIGMS NIH HHS
ID : F32 GM136057
Pays : United States
Organisme : NIGMS NIH HHS
ID : P41 GM132087
Pays : United States
Organisme : NIGMS NIH HHS
ID : R35 GM124780
Pays : United States

Déclaration de conflit d'intérêts

The authors have declared that no competing interests exist.

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Auteurs

Hans M Dalton (HM)

Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.

Raghuvir Viswanatha (R)

Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, Massachusetts, United States of America.

Roderick Brathwaite (R)

Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, Massachusetts, United States of America.

Jae Sophia Zuno (JS)

Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.

Alexys R Berman (AR)

Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.

Rebekah Rushforth (R)

Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.

Stephanie E Mohr (SE)

Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, Massachusetts, United States of America.

Norbert Perrimon (N)

Department of Genetics, Blavatnik Institute, Harvard Medical School, Boston, Massachusetts, United States of America.
Howard Hughes Medical Institute, Boston, Massachusetts, United States of America.

Clement Y Chow (CY)

Department of Human Genetics, University of Utah School of Medicine, Salt Lake City, Utah, United States of America.

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