Integrating ZooMS and zooarchaeology: New data from the Uluzzian levels of Uluzzo C Rock Shelter, Roccia San Sebastiano cave and Riparo del Broion.
Journal
PloS one
ISSN: 1932-6203
Titre abrégé: PLoS One
Pays: United States
ID NLM: 101285081
Informations de publication
Date de publication:
2022
2022
Historique:
received:
14
06
2022
accepted:
20
09
2022
entrez:
13
10
2022
pubmed:
14
10
2022
medline:
18
10
2022
Statut:
epublish
Résumé
In this study we explore the potential of combining traditional zooarchaeological determination and proteomic identification of morphologically non-diagnostic bone fragments (ZooMS) collected from the Uluzzian levels of three Italian sites: Uluzzo C Rock Shelter, Roccia San Sebastiano cave, and Riparo del Broion. Moreover, we obtained glutamine deamidation ratios for all the contexts analysed during routine ZooMS screening of faunal samples, giving information on collagen preservation. We designed a selection protocol that maximizes the efficiency of the proteomics analyses by excluding particularly compromised fragments (e.g. from taphonomic processes), and that aims to identify new human fragments by favouring bones showing morphological traits more similar to Homo. ZooMS consistently provided taxonomic information in agreement with the faunal spectra outlined by traditional zooarchaeology. Our approach allows us to delineate and appreciate differences between the analysed contexts, particularly between the northern and southern sites, related to faunal, environmental, and climate composition, although no human remains were identified. We reconstructed the faunal assemblage of the different sites, giving voice to morphologically undiagnostic bone fragments. Thus, the combination of these analyses provides a more complete picture of the faunal assemblage and of the paleoenvironment during the Middle-Upper Palaeolithic transition in Italy.
Identifiants
pubmed: 36227961
doi: 10.1371/journal.pone.0275614
pii: PONE-D-22-17047
pmc: PMC9560625
doi:
Substances chimiques
Glutamine
0RH81L854J
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
e0275614Déclaration de conflit d'intérêts
The authors have declared that no competing interests exist.
Références
Nature. 2019 May;569(7756):409-412
pubmed: 31043746
Sci Rep. 2019 Aug 26;9(1):12350
pubmed: 31451791
Anal Biochem. 1974 May;59(1):319-22
pubmed: 4407737
J Proteome Res. 2018 Mar 2;17(3):936-945
pubmed: 29384680
Nature. 2011 Nov 02;479(7374):525-8
pubmed: 22048311
PLoS One. 2015 Jul 08;10(7):e0131181
pubmed: 26154139
J Hum Evol. 2017 Nov;112:70-78
pubmed: 29037417
Proc Natl Acad Sci U S A. 2016 Oct 4;113(40):11162-11167
pubmed: 27638212
J Phys Chem A. 2009 Feb 12;113(6):1111-20
pubmed: 19152321
Sci Rep. 2020 Oct 14;10(1):17244
pubmed: 33057088
Sci Rep. 2016 Mar 29;6:23559
pubmed: 27020421
Anal Chem. 2012 Nov 6;84(21):9041-8
pubmed: 23030643
J Hum Evol. 2020 Oct;147:102867
pubmed: 32889336
J Quat Sci. 2022 Feb;37(2):235-256
pubmed: 35874301
Rapid Commun Mass Spectrom. 2012 Oct 15;26(19):2319-27
pubmed: 22956324
Rapid Commun Mass Spectrom. 2016 Jan 30;30(2):251-5
pubmed: 26689157
Sci Rep. 2021 Jul 29;11(1):15457
pubmed: 34326389
J Anthropol Sci. 2018 Dec 31;96:125-160
pubmed: 30036183
Anal Chem. 2010 Jun 1;82(11):4648-51
pubmed: 20465224
PLoS One. 2021 May 18;16(5):e0251061
pubmed: 34003857
Rapid Commun Mass Spectrom. 2009 Dec;23(23):3843-54
pubmed: 19899187
Mol Cell Proteomics. 2011 Oct;10(10):O111.009381
pubmed: 21784994
Science. 2015 May 15;348(6236):793-6
pubmed: 25908660
J Proteomics. 2021 Feb 20;233:104078
pubmed: 33338688
Proc Biol Sci. 2012 Dec 7;279(1748):4724-33
pubmed: 23055061
Nature. 2014 Aug 21;512(7514):306-9
pubmed: 25143113
Anal Biochem. 2009 Sep 1;392(1):12-21
pubmed: 19457431
PLoS One. 2018 May 9;13(5):e0196786
pubmed: 29742147
Nature. 2020 May;581(7808):299-302
pubmed: 32433609
Am J Biol Anthropol. 2022 Sep;179(1):18-30
pubmed: 36790758
Biochemistry. 1974 Jul 30;13(16):3405-10
pubmed: 4601435
Forensic Sci Int. 2016 Mar;260:104.e1-104.e17
pubmed: 26786143
Philos Trans R Soc Lond B Biol Sci. 1992 Aug 29;337(1280):149-57
pubmed: 1357689