Predicting Eye and Hair Color in a Turkish Population Using the HIrisPlex System.

HIrisPlex forensic DNA phenotyping population differences prediction accuracy

Journal

Genes
ISSN: 2073-4425
Titre abrégé: Genes (Basel)
Pays: Switzerland
ID NLM: 101551097

Informations de publication

Date de publication:
11 11 2022
Historique:
received: 07 10 2022
revised: 05 11 2022
accepted: 08 11 2022
entrez: 24 11 2022
pubmed: 25 11 2022
medline: 29 11 2022
Statut: epublish

Résumé

Forensic DNA Phenotyping (FDP) can reveal the appearance of an unknown individual by predicting the ancestry, phenotype (i.e., hair, eye, skin color), and age from DNA obtained at the crime scene. The HIrisPlex system has been developed to simultaneously predict eye and hair color. However, the prediction accuracy of the system needs to be assessed for the tested population before implementing FDP in casework. In this study, we evaluated the performance of the HIrisPlex system on 149 individuals from the Turkish population. We applied the single-based extension (SNaPshot chemistry) method and used the HIrisPlex online tool to test the prediction of the eye and hair colors. The accuracy of the HIrisPlex system was assessed through the calculation of the area under the receiver characteristic operating curves (AUC), sensitivity, specificity, positive predictive value (PPV), and negative predictive value (NPV). The results showed that the proposed method successfully predicted the eye and hair color, especially for blue (100%) and brown (95.60%) eye and black (95.23) and brown (98.94) hair colors. As observed in previous studies, the system failed to predict intermediate eye color, representing 25% in our cohort. The majority of incorrect predictions were observed for blond hair color (40.7%). Previous HIrisPlex studies have also noted difficulties with these phenotypes. Our study shows that the HIrisPlex system can be applied to forensic casework in Turkey with careful interpretation of the data, particularly intermediate eye color and blond hair color.

Identifiants

pubmed: 36421769
pii: genes13112094
doi: 10.3390/genes13112094
pmc: PMC9690125
pii:
doi:

Substances chimiques

DNA 9007-49-2

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

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Auteurs

Ilksen Sari O (I)

Institute of Forensic Sciences and Legal Medicine, Istanbul University-Cerrahpasa, 34500 Istanbul, Turkey.
Department of Medical Services and Techniques, Vocational School of Health Services, Istanbul Gelisim University, 34310 Istanbul, Turkey.

Sumeyye Zulal Simsek (SZ)

Institute of Forensic Sciences and Legal Medicine, Istanbul University-Cerrahpasa, 34500 Istanbul, Turkey.

Gonul Filoglu (G)

Institute of Forensic Sciences and Legal Medicine, Istanbul University-Cerrahpasa, 34500 Istanbul, Turkey.

Ozlem Bulbul (O)

Institute of Forensic Sciences and Legal Medicine, Istanbul University-Cerrahpasa, 34500 Istanbul, Turkey.

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