Advancing CYP2D6 Pharmacogenetics through a Pharmacoequity Lens.


Journal

Clinical pharmacology and therapeutics
ISSN: 1532-6535
Titre abrégé: Clin Pharmacol Ther
Pays: United States
ID NLM: 0372741

Informations de publication

Date de publication:
07 2023
Historique:
received: 10 09 2022
accepted: 08 03 2023
medline: 20 6 2023
pubmed: 17 3 2023
entrez: 16 3 2023
Statut: ppublish

Résumé

Over 20% of US Food and Drug Administration (FDA)-approved drugs in the United States are metabolized by the hepatic enzyme cytochrome P450 2D6 (CYP2D6). The gene encoding CYP2D6 is highly polymorphic and genetic variation has been shown to impact drug response for many commonly dispensed drugs including opioids and antidepressants. Thus, it is important to understand an individual's CYP2D6 metabolizer status to optimize treatment outcomes for patients taking medications that are metabolized by this enzyme. Consequently, clinical CYP2D6 pharmacogenetic testing is being implemented by a growing number of health centers. Furthermore, clinical guidelines currently recommend adapting therapeutic regimens based on CYP2D6 genotype-informed phenotype. However, CYP2D6 genetic variation varies considerably across global populations and many allelic variants, or star alleles, are predominantly found in certain ancestral populations. Although CYP2D6 genetic variation has been extensively studied, there is still a paucity of information for many non-European populations. As has been shown for other pharmacogenes in randomized controlled trials, results from European populations cannot simply be extrapolated to other groups and, in some cases, even has the potential to cause harm. Therefore, enhanced inclusion in pharmacogenetic studies is urgently needed to increase ancestral representation, determine the extent of global CYP2D6 genetic variation (e.g., ancestry-specific variants), and determine the clinical impact of this variation on clinical treatment outcome. This review highlights knowledge gaps, challenges, and future directions in CYP2D6 pharmacogenomics through a unique pharmacoequity lens to address health inequities that hamper our ability to optimize drug therapy for improved pharmacological outcomes in diverse populations globally.

Identifiants

pubmed: 36924260
doi: 10.1002/cpt.2890
doi:

Substances chimiques

Cytochrome P-450 CYP2D6 EC 1.14.14.1
Antidepressive Agents 0
Pharmaceutical Preparations 0

Types de publication

Journal Article Review Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

69-76

Informations de copyright

© 2023 The Authors. Clinical Pharmacology & Therapeutics © 2023 American Society for Clinical Pharmacology and Therapeutics.

Références

Cavallari, L.H. et al. Multi-site investigation of strategies for the clinical implementation of CYP2D6 genotyping to guide drug prescribing. Genet. Med.21, 2255-2263 (2019).
Gasche, Y. et al. Codeine intoxication associated with ultrarapid CYP2D6 metabolism. N. Engl. J. Med.351, 2827-2831 (2004).
Preissner, S.C., Hoffmann, M.F., Preissner, R., Dunkel, M., Gewiess, A. & Preissner, S. Polymorphic cytochrome P450 enzymes (CYPs) and their role in personalized therapy. PLoS One8, e82562 (2013).
Zhou, S.-F. Polymorphism of human cytochrome P450 2D6 and its clinical significance: part II. Clin. Pharmacokinet.48, 761-804 (2009).
Iversen, D.B., Andersen, N.E., Dunvald, A.-C.D., Pottegård, A. & Stage, T.B. Drug metabolism and drug transport of the 100 most prescribed oral drugs. Basic Clin. Pharmacol. Toxicol.131, 311-324 (2022).
Gaedigk, A., Casey, S.T., Whirl-Carrillo, M., Miller, N.A. & Klein, T.E. Pharmacogene variation consortium: a global resource and repository for pharmacogene variation. Clin. Pharmacol. Ther.110, 542-545 (2021).
Caudle, K.E. et al. Standardizing CYP2D6 genotype to phenotype translation: consensus recommendations from the clinical pharmacogenetics implementation consortium and Dutch pharmacogenetics working group. Clin. Transl. Sci.13, 116-124 (2020).
Nofziger, C. et al. PharmVar GeneFocus: CYP2D6. Clin. Pharmacol. Ther.107, 154-170 (2020).
Gaedigk, A., Simon, S.D., Pearce, R.E., Bradford, L.D., Kennedy, M.J. & Leeder, J.S. The CYP2D6 activity score: translating genotype information into a qualitative measure of phenotype. Clin. Pharmacol. Ther.83, 234-242 (2008).
Gedde-Dahl, A., Spigset, O. & Molden, E. Co-prescription of metoprolol and CYP2D6-inhibiting antidepressants before and after implementation of an optimized drug interaction database in Norway. Eur. J. Clin. Pharmacol.78, 1623-1632 (2022).
Klomp, S.D., Manson, M.L., Guchelaar, H.-J. & Swen, J.J. Phenoconversion of cytochrome P450 metabolism: a systematic review. J. Clin. Med.9 (2020).
Swen, J.J. et al. Pharmacogenetics: from bench to byte. Clin. Pharmacol. Ther.83, 781-787 (2008).
Swen, J.J. et al. Pharmacogenetics: from bench to byte-an update of guidelines. Clin. Pharmacol. Ther.89, 662-673 (2011).
Brouwer, J.M.J.L. et al. Dutch pharmacogenetics working group (DPWG) guideline for the gene-drug interaction between CYP2C19 and CYP2D6 and SSRIs. Eur. J. Hum. Genet.30, 1114-1120 (2021).
Nijenhuis, M. et al. Dutch pharmacogenetics working group (DPWG) guideline for the gene-drug interaction of CYP2D6 and COMT with atomoxetine and methylphenidate. Eur. J. Hum. Genet. (2022). [Online ahead of print]. https://doi.org/10.1038/s41431-022-01262-z.
Matic, M. et al. Dutch pharmacogenetics working group (DPWG) guideline for the gene-drug interaction between CYP2D6 and opioids (codeine, tramadol and oxycodone). Eur. J. Hum. Genet.30, 1105-1113 (2021).
Ramsey, L.B. et al. Implementation of pharmacogenetics at Cincinnati children's hospital medical center: lessons learned over 14 years of personalizing medicine. Clin. Pharmacol. Ther.105, 49-52 (2019).
Pratt, V.M. et al. Recommendations for clinical CYP2D6 genotyping allele selection: a joint consensus recommendation of the association for molecular pathology, college of american pathologists, dutch pharmacogenetics working group of the royal dutch pharmacists association, and the european society for pharmacogenomics and personalized therapy. J. Mol. Diagn.23, 1047-1064 (2021).
Crews, K.R. et al. Clinical pharmacogenetics implementation consortium guideline for CYP2D6, OPRM1, and COMT genotypes and select opioid therapy. Clin. Pharmacol. Ther.110, 888-896 (2021).
FDA warns against use of codeine and tramadol in children and breastfeeding women. Med. Lett. Drugs Ther.59, 86-88 (2017).
Plueschke, K. et al. Prescribing patterns of codeine and alternative medicines in children in europe. Drug Saf.45, 1069-1081 (2022).
Gaedigk, A., Sangkuhl, K., Whirl-Carrillo, M., Klein, T. & Leeder, J.S. Prediction of CYP2D6 phenotype from genotype across world populations. Genet. Med.19, 69-76 (2017).
Masimirembwa, C., Persson, I., Bertilsson, L., Hasler, J. & Ingelman-Sundberg, M. A novel mutant variant of the CYP2D6 gene (CYP2D6*17) common in a black African population: association with diminished debrisoquine hydroxylase activity. Br. J. Clin. Pharmacol.42, 713-719 (1996).
Wennerholm, A. et al. Decreased capacity for debrisoquine metabolism among black Tanzanians: analyses of the CYP2D6 genotype and phenotype. Pharmacogenetics9, 707-714 (1999).
Panserat, S., Sica, L., Gérard, N., Mathieu, H., Jacqz-Aigrain, E. & Krishnamoorthy, R. CYP2D6 polymorphism in a Gabonese population: contribution of the CYP2D6*2 and CYP2D6*17 alleles to the high prevalence of the intermediate metabolic phenotype. Br. J. Clin. Pharmacol.47, 121-124 (1999).
Wennerholm, A. et al. The African-specific CYP2D617 allele encodes an enzyme with changed substrate specificity. Clin. Pharmacol. Ther.71, 77-88 (2002).
Ensom, M.H., Chang, T.K. & Patel, P. Pharmacogenetics: the therapeutic drug monitoring of the future? Clin. Pharmacokinet.40, 783-802 (2001).
Martin, A.R., Kanai, M., Kamatani, Y., Okada, Y., Neale, B.M. & Daly, M.J. Clinical use of current polygenic risk scores may exacerbate health disparities. Nat. Genet.51, 584-591 (2019).
Koopmans, A.B., Braakman, M.H., Vinkers, D.J., Hoek, H.W. & van Harten, P.N. Meta-analysis of probability estimates of worldwide variation of CYP2D6 and CYP2C19. Transl. Psychiatry11, 141 (2021).
Preskorn, S.H. et al. Cytochrome P450 2D6 phenoconversion is common in patients being treated for depression: implications for personalized medicine. J. Clin. Psychiatry74, 614-621 (2013).
Hoshitsuki, K. et al. Challenges in clinical implementation of CYP2D6 genotyping: choice of variants to test affects phenotype determination. Genet. Med.22, 232-233 (2019).
Wang, W.Y. et al. Characterization of novel CYP2D6 alleles across sub-Saharan African populations. J. Pers. Med.12 (2022).
Kimmel, S.E. et al. A pharmacogenetic versus a clinical algorithm for warfarin dosing. N. Engl. J. Med.369, 2283-2293 (2013).
Wu, A.H., White, M.J., Oh, S. & Burchard, E. The Hawaii clopidogrel lawsuit: the possible effect on clinical laboratory testing. Perinat. Med.12, 179-181 (2015).
Rhee, J.Y. et al. Palliative care in Africa: a scoping review from 2005-16. Lancet Oncol.18, e522-e531 (2017).
Slomp, C. et al. Pharmacogenomic testing for major depression: a qualitative study of the perceptions of people with lived experience and professional stakeholders. Can. J. Psychiatr. (2022). [Online ahead of print]. https://doi.org/10.1177/07067437221140383.
Sargent, L.J. et al. The translational approaches to personalized health collaborative: pharmacogenomics for african american older adults. Clin. Transl. Sci.14, 437-444 (2021).
Beans, J.A. et al. Communicating precision medicine research: multidisciplinary teams and diverse communities. Public Health Genomics1-9, 1-9 (2022).
Brown, K.E., Fohner, A.E. & Woodahl, E.L. Beyond the individual: community-centric approaches to increase diversity in biomedical research. Clin. Pharmacol. Ther.113, 509-517 (2022).
Burke, W. et al. Values and practices to strengthen genetic research partnerships with indigenous communities. Prog. Community Health Partnersh.16, 583-592 (2022).
Horowitz, C.R. et al. Determining the effects and challenges of incorporating genetic testing into primary care management of hypertensive patients with African ancestry. Contemp. Clin. Trials47, 101-108 (2016).
van der Lee, M. et al. Toward predicting CYP2D6-mediated variable drug response from CYP2D6 gene sequencing data. Sci. Transl. Med.13 (2021).
Zhou, Y. & Lauschke, V.M. The genetic landscape of major drug metabolizing cytochrome P450 genes-an updated analysis of population-scale sequencing data. Pharmacogenomics J.22, 284-293 (2022).
Yanagihara, R. et al. Building a diverse workforce and thinkforce to reduce health disparities. Int. J. Environ. Res. Public Health18 (2021).
Chenoweth, M.J. et al. Global pharmacogenomics within precision medicine: challenges and opportunities. Clin. Pharmacol. Ther.107, 57-61 (2019).
Tata, E.B., Ambele, M.A. & Pepper, M.S. Barriers to implementing clinical pharmacogenetics testing in sub-Saharan Africa. A critical review. Pharmaceutics12 (2020).
da Rocha, J.E.B. et al. The extent and impact of variation in ADME genes in sub-Saharan African populations. Front. Pharmacol.12, 634016 (2021).
Twesigomwe, D. et al. Characterisation of CYP2D6 pharmacogenetic variation in sub-Saharan African populations. Clin. Pharmacol. Ther.113, 643-659 (2022).
Capers, Q. & Thomas, L. Enhancing the pipeline for a diverse workforce. Psychiatr. Clin. North Am.45, 297-302 (2022).
Thoman, D.B., Brown, E.R., Mason, A.Z., Harmsen, A.G. & Smith, J.L. The role of altruistic values in motivating underrepresented minority students for biomedicine. Bioscience65, 183-188 (2015).
Goodman, C.W. & Brett, A.S. Race and pharmacogenomics-personalized medicine or misguided practice? JAMA 325, 625-626 (2021).
Oni-Orisan, A., Mavura, Y., Banda, Y., Thornton, T.A. & Sebro, R. Embracing genetic diversity to improve black health. N. Engl. J. Med.384, 1163-1167 (2021).
Huddart, R. et al. Standardized biogeographic grouping system for annotating populations in pharmacogenetic research. Clin. Pharmacol. Ther.105, 1256-1262 (2019).

Auteurs

Oyinlade Kehinde (O)

Child and Adolescents Mental Health Service Center, Federal Neuro-Psychiatric Hospital, Lagos, Nigeria.

Laura B Ramsey (LB)

Department of Pediatrics, University of Cincinnati College of Medicine, Cincinnati, Ohio, USA.
Divisions of Clinical Pharmacology and Research in Patient Services, Cincinnati Children's Hospital Medical Center, Cincinnati, Ohio, USA.

Andrea Gaedigk (A)

Division of Clinical Pharmacology, Toxicology & Therapeutic Innovation, Children's Mercy Research Institute (CMRI), Kansas City, Missouri, USA.
School of Medicine, University of Missouri-Kansas City, Kansas City, Missouri, USA.

Akinyemi Oni-Orisan (A)

Department of Clinical Pharmacy, University of California San Francisco, San Francisco, California, USA.
Institute for Human Genetics, University of California San Francisco, San Francisco, California, USA.
Department of Bioengineering and Therapeutic Sciences, University of California San Francisco, San Francisco, California, USA.

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