Regulatory mechanism of formaldehyde release in heme degradation catalyzed by Staphylococcus aureus IsdG.


Journal

The Journal of biological chemistry
ISSN: 1083-351X
Titre abrégé: J Biol Chem
Pays: United States
ID NLM: 2985121R

Informations de publication

Date de publication:
05 2023
Historique:
received: 08 02 2023
revised: 06 03 2023
accepted: 21 03 2023
medline: 29 5 2023
pubmed: 26 3 2023
entrez: 25 3 2023
Statut: ppublish

Résumé

IsdG-type enzymes catalyze the noncanonical degradation of heme to iron, staphylobilin (SB), and formaldehyde (HCHO), presumably by binding heme in an unusually distorted conformation. Their unique mechanism has been elucidated for MhuD from Mycobacterium tuberculosis, revealing an unusual ring opening of hydroxyheme by dioxygenation. A similar mechanism has been postulated for other IsdG enzymes; however, MhuD, which is special as an IsdG-type enzyme, retains a formyl group in the linearized tetrapyrrole. Recent reports on Staphylococcus aureus IsdG have suggested the formation of SB retaining a formyl group (formyl-SB), but its identification is preliminary. Furthermore, the reaction properties of formyl-SB and the mechanism of HCHO release remain unclear. In this study, the complex reaction of S. aureus IsdG was reexamined to elucidate its mechanism, including the identification of reaction products and their control mechanisms. Depending on the reaction conditions, IsdG produced both SB and formyl-SB as the main product, the latter of which was isolated and characterized by MS and NMR measurements. The formyl-SB product was generated upon the reaction between hydroxyheme-IsdG and O

Identifiants

pubmed: 36965616
pii: S0021-9258(23)00290-9
doi: 10.1016/j.jbc.2023.104648
pmc: PMC10148152
pii:
doi:

Substances chimiques

Formaldehyde 1HG84L3525
Heme 42VZT0U6YR
Heme Oxygenase (Decyclizing) EC 1.14.14.18
IsdG protein, Staphylococcus aureus EC 1.14.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

104648

Informations de copyright

Copyright © 2023 The Author. Published by Elsevier Inc. All rights reserved.

Déclaration de conflit d'intérêts

Conflict of interest The author declares that he has no conflicts of interest with the contents of this article.

Auteurs

Toshitaka Matsui (T)

Institute of Multidisciplinary Research for Advanced Materials, Tohoku University, Sendai, Japan; Department of Chemistry, Graduate School of Science, Tohoku University, Sendai, Miyagi, Japan; Department of Molecular and Chemical Life Sciences, Graduate School of Life Sciences, Tohoku University, Sendai, Miyagi, Japan. Electronic address: toshitaka.matsui.d5@tohoku.ac.jp.

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Classifications MeSH