OBERON3 and SUPPRESSOR OF MAX2 1-LIKE proteins form a regulatory module driving phloem development.
Journal
Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555
Informations de publication
Date de publication:
14 04 2023
14 04 2023
Historique:
received:
14
10
2021
accepted:
31
03
2023
medline:
18
4
2023
entrez:
14
4
2023
pubmed:
15
4
2023
Statut:
epublish
Résumé
Spatial specificity of cell fate decisions is central for organismal development. The phloem tissue mediates long-distance transport of energy metabolites along plant bodies and is characterized by an exceptional degree of cellular specialization. How a phloem-specific developmental program is implemented is, however, unknown. Here we reveal that the ubiquitously expressed PHD-finger protein OBE3 forms a central module with the phloem-specific SMXL5 protein for establishing the phloem developmental program in Arabidopsis thaliana. By protein interaction studies and phloem-specific ATAC-seq analyses, we show that OBE3 and SMXL5 proteins form a complex in nuclei of phloem stem cells where they promote a phloem-specific chromatin profile. This profile allows expression of OPS, BRX, BAM3, and CVP2 genes acting as mediators of phloem differentiation. Our findings demonstrate that OBE3/SMXL5 protein complexes establish nuclear features essential for determining phloem cell fate and highlight how a combination of ubiquitous and local regulators generate specificity of developmental decisions in plants.
Identifiants
pubmed: 37059727
doi: 10.1038/s41467-023-37790-5
pii: 10.1038/s41467-023-37790-5
pmc: PMC10104830
doi:
Substances chimiques
Arabidopsis Proteins
0
Membrane Proteins
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
2128Subventions
Organisme : European Research Council
ID : 647148
Pays : International
Informations de copyright
© 2023. The Author(s).
Références
Plant Cell. 2015 Nov;27(11):3143-59
pubmed: 26546447
Development. 2012 Apr;139(8):1391-8
pubmed: 22378640
PLoS One. 2013 Dec 20;8(12):e83043
pubmed: 24376629
Curr Biol. 2015 Oct 5;25(19):2584-90
pubmed: 26387715
Nat Methods. 2013 Dec;10(12):1213-8
pubmed: 24097267
Proc Natl Acad Sci U S A. 2014 Aug 5;111(31):11551-6
pubmed: 25049386
Nat Plants. 2022 Jul;8(7):817-827
pubmed: 35817820
Nature. 2020 Jul;583(7815):277-281
pubmed: 32528176
Plant Cell. 2006 May;18(5):1121-33
pubmed: 16531494
Development. 2008 May;135(10):1751-9
pubmed: 18403411
Proc Natl Acad Sci U S A. 2013 Apr 23;110(17):7074-9
pubmed: 23569225
Development. 2009 Jun;136(12):2059-67
pubmed: 19465596
Plant J. 1998 Dec;16(6):735-43
pubmed: 10069079
Development. 2015 Apr 15;142(8):1437-46
pubmed: 25813544
Curr Opin Plant Biol. 2018 Jun;43:22-28
pubmed: 29278791
Plant Cell. 2021 Apr 17;33(2):200-223
pubmed: 33582756
Plant Cell. 2016 Jul;28(7):1581-601
pubmed: 27317673
Science. 2007 Nov 2;318(5851):801-6
pubmed: 17975066
Nature. 2010 Apr 1;464(7289):788-91
pubmed: 20360743
Trends Biochem Sci. 2011 Jul;36(7):364-72
pubmed: 21514168
Curr Biol. 2020 Mar 9;30(5):755-766.e4
pubmed: 32037095
Development. 2012 Apr;139(7):1306-15
pubmed: 22395740
Plant Cell. 2008 Jun;20(6):1494-503
pubmed: 18523061
Nat Rev Microbiol. 2006 May;4(5):405-11
pubmed: 16518419
Plant J. 2020 Jun;102(5):903-915
pubmed: 31910293
BMC Genomics. 2014 Apr 15;15:284
pubmed: 24735413
PLoS One. 2016 May 19;11(5):e0155657
pubmed: 27196372
Proc Natl Acad Sci U S A. 1997 Mar 18;94(6):2122-7
pubmed: 9122158
Nat Methods. 2012 Jun 28;9(7):676-82
pubmed: 22743772
Curr Biol. 2017 Apr 24;27(8):1241-1247
pubmed: 28392107
Nat Plants. 2018 Jun;4(6):376-390
pubmed: 29808026
J Exp Bot. 2013 Nov;64(16):4839-50
pubmed: 24106290
Plant J. 2003 Mar;33(5):949-56
pubmed: 12609035
Proc Natl Acad Sci U S A. 1983 Aug;80(15):4803-7
pubmed: 6308651
Nature. 2013 Dec 19;504(7480):406-10
pubmed: 24336215
Curr Opin Plant Biol. 2009 Oct;12(5):628-36
pubmed: 19700365
Dev Cell. 2020 Jan 27;52(2):223-235.e5
pubmed: 31866202
Sci Adv. 2017 Jun 02;3(6):e1601217
pubmed: 28630893
Plant Mol Biol. 2000 Apr;42(6):819-32
pubmed: 10890530
Plant J. 2013 Sep;75(6):989-1002
pubmed: 23763263
Nature. 1997 Nov 20;390(6657):287-9
pubmed: 9384380
Proc Natl Acad Sci U S A. 2008 Nov 4;105(44):16831-6
pubmed: 18854416
Nucleic Acids Res. 2013 Jan;41(Database issue):D991-5
pubmed: 23193258
Curr Protoc Mol Biol. 2015 Jan 05;109:21.29.1-21.29.9
pubmed: 25559105
Curr Biol. 2019 Mar 4;29(5):R173-R181
pubmed: 30836090
New Phytol. 2016 Apr;210(1):45-50
pubmed: 26171671
Development. 2019 Jan 9;146(1):
pubmed: 30626594
Curr Protoc Plant Biol. 2020 Dec;5(4):e20120
pubmed: 33034428
Science. 1990 Nov 16;250(4983):959-66
pubmed: 17746920
Plant Cell. 2015 Nov;27(11):3128-42
pubmed: 26546446
Nat Methods. 2012 Mar 04;9(4):357-9
pubmed: 22388286
Nature. 2018 Jun;558(7709):297-300
pubmed: 29875411
Nature. 2019 Jan;565(7740):490-494
pubmed: 30626969
Mol Cell. 2010 May 28;38(4):576-89
pubmed: 20513432
Plant Cell. 2016 Jun;28(6):1250-62
pubmed: 27194709
New Phytol. 2020 Jan;225(2):621-636
pubmed: 31442309
Development. 2015 Dec 1;142(23):4168-79
pubmed: 26493404
Curr Biol. 2019 Aug 5;29(15):2501-2508.e3
pubmed: 31327718
Nucleic Acids Res. 2014 Jul;42(Web Server issue):W187-91
pubmed: 24799436
Annu Rev Plant Biol. 2014;65:607-38
pubmed: 24579995
EMBO Rep. 2017 Aug;18(8):1367-1381
pubmed: 28607033
Plant J. 2009 Aug;59(3):426-36
pubmed: 19392692
J Integr Plant Biol. 2013 Apr;55(4):294-388
pubmed: 23462277
Trends Genet. 2001 Jun;17(6):346-52
pubmed: 11377797
Plant Cell. 1999 Apr;11(4):739-50
pubmed: 10213790
Bioinformatics. 2009 Aug 15;25(16):2078-9
pubmed: 19505943
Plant J. 2017 Jun;90(6):1064-1078
pubmed: 28267232
Elife. 2017 Feb 23;6:
pubmed: 28230527
Nature. 2003 Nov 13;426(6963):181-6
pubmed: 14614507
Bioinformatics. 2010 Mar 15;26(6):841-2
pubmed: 20110278
Nature. 2013 Dec 19;504(7480):401-5
pubmed: 24336200
J Plant Res. 2018 Jan;131(1):31-36
pubmed: 29204753
Brief Bioinform. 2013 Mar;14(2):178-92
pubmed: 22517427
Planta. 2016 Jun;243(6):1339-50
pubmed: 26898553
J Bacteriol. 1988 Sep;170(9):4181-7
pubmed: 3410827