The neighbouring genes AvrLm10A and AvrLm10B are part of a large multigene family of cooperating effector genes conserved in Dothideomycetes and Sordariomycetes.

Brassica napus Fusarium oxysporum Leptosphaeria maculans avirulence effector family pathogenic fungi resistance

Journal

Molecular plant pathology
ISSN: 1364-3703
Titre abrégé: Mol Plant Pathol
Pays: England
ID NLM: 100954969

Informations de publication

Date de publication:
08 2023
Historique:
revised: 22 03 2023
received: 27 09 2022
accepted: 26 03 2023
medline: 17 7 2023
pubmed: 2 5 2023
entrez: 2 5 2023
Statut: ppublish

Résumé

Fungal effectors (small-secreted proteins) have long been considered as species or even subpopulation-specific. The increasing availability of high-quality fungal genomes and annotations has allowed the identification of trans-species or trans-genera families of effectors. Two avirulence effectors, AvrLm10A and AvrLm10B, of Leptosphaeria maculans, the fungus causing stem canker of oilseed rape, are members of such a large family of effectors. AvrLm10A and AvrLm10B are neighbouring genes, organized in divergent transcriptional orientation. Sequence searches within the L. maculans genome showed that AvrLm10A/AvrLm10B belong to a multigene family comprising five pairs of genes with a similar tail-to-tail organization. The two genes, in a pair, always had the same expression pattern and two expression profiles were distinguished, associated with the biotrophic colonization of cotyledons and/or petioles and stems. Of the two protein pairs further investigated, AvrLm10A_like1/AvrLm10B_like1 and AvrLm10A_like2/AvrLm10B_like2, the second one had the ability to physically interact, similarly to what was previously described for the AvrLm10A/AvrLm10B pair, and cross-interactions were also detected for two pairs. AvrLm10A homologues were identified in more than 30 Dothideomycete and Sordariomycete plant-pathogenic fungi. One of them, SIX5, is an effector from Fusarium oxysporum f. sp. lycopersici physically interacting with the avirulence effector Avr2. We found that AvrLm10A/SIX5 homologues were associated with at least eight distinct putative effector families, suggesting that AvrLm10A/SIX5 is able to cooperate with different effectors. These results point to a general role of the AvrLm10A/SIX5 proteins as "cooperating proteins", able to interact with diverse families of effectors whose encoding gene is co-regulated with the neighbouring AvrLm10A homologue.

Identifiants

pubmed: 37128172
doi: 10.1111/mpp.13338
pmc: PMC10346447
doi:

Substances chimiques

Proteins 0

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Pagination

914-931

Informations de copyright

© 2023 The Authors. Molecular Plant Pathology published by British Society for Plant Pathology and John Wiley & Sons Ltd.

Références

PLoS Pathog. 2015 Oct 27;11(10):e1005228
pubmed: 26506000
New Phytol. 2013 May;198(3):887-898
pubmed: 23406519
Nat Rev Genet. 2014 Dec;15(12):797-813
pubmed: 25266034
J Biomed Opt. 2003 Jul;8(3):362-7
pubmed: 12880340
Curr Opin Plant Biol. 2021 Aug;62:102054
pubmed: 33992840
Mol Plant Pathol. 2014 Jun;15(5):523-30
pubmed: 24279453
Front Plant Sci. 2015 Nov 17;6:980
pubmed: 26635823
Nucleic Acids Res. 2007 Jul;35(Web Server issue):W645-8
pubmed: 17526519
Mol Biol Evol. 2018 Feb 1;35(2):518-522
pubmed: 29077904
Sci Data. 2018 Nov 06;5:180235
pubmed: 30398473
Annu Rev Plant Biol. 2015;66:513-45
pubmed: 25923844
Nat Methods. 2017 Jun;14(6):587-589
pubmed: 28481363
Mol Plant. 2018 May 7;11(5):691-705
pubmed: 29481865
BMC Biol. 2021 Mar 23;19(1):55
pubmed: 33757516
New Phytol. 2017 Apr;214(2):526-532
pubmed: 28084619
Mol Plant Pathol. 2022 May;23(5):733-748
pubmed: 35239989
Curr Opin Plant Biol. 2020 Aug;56:9-19
pubmed: 32247857
New Phytol. 2017 Nov;216(3):897-914
pubmed: 28857169
Annu Rev Phytopathol. 2018 Aug 25;56:21-40
pubmed: 29768136
New Phytol. 2010 Jan;185(1):285-99
pubmed: 19814776
Mol Plant Microbe Interact. 2006 Dec;19(12):1420-30
pubmed: 17153926
Mol Plant Pathol. 2018 Jul;19(7):1754-1764
pubmed: 29330918
Phytopathology. 2004 Jun;94(6):578-83
pubmed: 18943482
Nat Protoc. 2017 Sep;12(9):1933-1950
pubmed: 28837131
PLoS Pathog. 2022 Jul 6;18(7):e1010664
pubmed: 35793393
PLoS Pathog. 2012;8(11):e1003020
pubmed: 23144620
New Phytol. 2015 Oct;208(2):507-18
pubmed: 25967461
Mol Plant Pathol. 2021 Dec;22(12):1599-1612
pubmed: 34467616
New Phytol. 2019 Jul;223(1):397-411
pubmed: 30802965
New Phytol. 2016 Mar;209(4):1613-24
pubmed: 26592855
Mol Plant Microbe Interact. 2002 Jul;15(7):672-82
pubmed: 12118883
New Phytol. 2021 Aug;231(4):1510-1524
pubmed: 33621369
PLoS Pathog. 2011 Jul;7(7):e1002147
pubmed: 21829350
Plant Cell. 2007 Sep;19(9):2898-912
pubmed: 17873095
Biotechniques. 2002 Jun;32(6):1372-4, 1376, 1378-9
pubmed: 12074169
Mol Plant Microbe Interact. 2018 Jan;31(1):145-162
pubmed: 29144204
Nat Commun. 2011 Feb 15;2:202
pubmed: 21326234
Mol Biol Evol. 2020 May 1;37(5):1530-1534
pubmed: 32011700
Mol Plant Microbe Interact. 2007 Apr;20(4):459-70
pubmed: 17427816
Mol Microbiol. 2009 Feb;71(4):851-63
pubmed: 19170874
Nature. 2006 Nov 16;444(7117):323-9
pubmed: 17108957
Mol Plant Microbe Interact. 2009 Aug;22(8):932-41
pubmed: 19589069
Plant Cell. 2015 Apr;27(4):1332-51
pubmed: 25888589
BMC Genomics. 2014 Oct 12;15:891
pubmed: 25306241
Mol Plant Pathol. 2023 Aug;24(8):914-931
pubmed: 37128172
Science. 2010 Aug 20;329(5994):953-5
pubmed: 20724636
Mol Plant Pathol. 2015 Sep;16(7):699-709
pubmed: 25492575
Mol Microbiol. 2006 Apr;60(1):67-80
pubmed: 16556221
Curr Biol. 2021 Apr 26;31(8):1653-1665.e5
pubmed: 33607033
BMC Genomics. 2012 Dec 11;13:694
pubmed: 23231440
Nature. 2003 Apr 24;422(6934):859-68
pubmed: 12712197
Commun Biol. 2021 Jun 9;4(1):707
pubmed: 34108627

Auteurs

Nacera Talbi (N)

BIOGER, INRAE, Université Paris-Saclay, Palaiseau, France.

Like Fokkens (L)

Molecular Plant Pathology, University of Amsterdam, Amsterdam, Netherlands.

Corinne Audran (C)

UMR LIPME, Université de Toulouse, INRAE, CNRS, Castanet-Tolosan, France.

Yohann Petit-Houdenot (Y)

BIOGER, INRAE, Université Paris-Saclay, Palaiseau, France.

Cécile Pouzet (C)

FRAIB-TRI Imaging Platform Facilities, FR AIB, Université de Toulouse, CNRS, Castanet-Tolosan, France.

Françoise Blaise (F)

BIOGER, INRAE, Université Paris-Saclay, Palaiseau, France.

Elise J Gay (EJ)

BIOGER, INRAE, Université Paris-Saclay, Palaiseau, France.

Thierry Rouxel (T)

BIOGER, INRAE, Université Paris-Saclay, Palaiseau, France.

Marie-Hélène Balesdent (MH)

BIOGER, INRAE, Université Paris-Saclay, Palaiseau, France.

Martijn Rep (M)

Molecular Plant Pathology, University of Amsterdam, Amsterdam, Netherlands.

Isabelle Fudal (I)

BIOGER, INRAE, Université Paris-Saclay, Palaiseau, France.

Articles similaires

Databases, Protein Protein Domains Protein Folding Proteins Deep Learning
Drought Resistance Gene Expression Profiling Gene Expression Regulation, Plant Gossypium Multigene Family
Genome, Viral Ralstonia Composting Solanum lycopersicum Bacteriophages
Capsicum Disease Resistance Plant Diseases Polymorphism, Single Nucleotide Ralstonia solanacearum

Classifications MeSH