ProbRank: An efficient DNA database search method for complex mixtures per a quantitative likelihood ratio model.
DNA database searches
DNAStatistX
Forensic science
ProbRank
Probabilistic genotyping
SmartRank
Journal
Forensic science international. Genetics
ISSN: 1878-0326
Titre abrégé: Forensic Sci Int Genet
Pays: Netherlands
ID NLM: 101317016
Informations de publication
Date de publication:
07 2023
07 2023
Historique:
received:
13
02
2023
revised:
04
04
2023
accepted:
27
04
2023
medline:
16
6
2023
pubmed:
8
5
2023
entrez:
7
5
2023
Statut:
ppublish
Résumé
Searching a DNA Database with a DNA profile from an evidentiary trace can provide investigative leads in a forensic case. Various searching approaches exist such as conventional methods based on matching alleles or more advanced methods computing likelihood ratios (LR) while considering drop-in and drop-out. Here we examine the potential of using a quantitative LR model (EuroForMix model incorporated in ProbRank method) that takes peak heights into account in comparison to a qualitative LR model (LRmix model implemented in SmartRank method). Both methods present DNA database candidates in order of decreasing LR. Especially regarding minor contributors in complex mixtures, the method using the quantitative model outperforms the method using the qualitative model in terms of sensitivity and specificity as more true donors and less adventitious matches are retrieved. ProbRank is to be implemented in DNAStatistX and is sufficiently fast for daily use.
Identifiants
pubmed: 37150077
pii: S1872-4973(23)00059-5
doi: 10.1016/j.fsigen.2023.102884
pii:
doi:
Substances chimiques
Complex Mixtures
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Langues
eng
Sous-ensembles de citation
IM
Pagination
102884Informations de copyright
Copyright © 2023 Elsevier B.V. All rights reserved.
Déclaration de conflit d'intérêts
Declaration of Competing Interest We have no conflict of interest. We confirm that neither the manuscript nor any parts of its content are under consideration or published in another journal.