Highly host-linked viromes in the built environment possess habitat-dependent diversity and functions for potential virus-host coevolution.
Journal
Nature communications
ISSN: 2041-1723
Titre abrégé: Nat Commun
Pays: England
ID NLM: 101528555
Informations de publication
Date de publication:
09 05 2023
09 05 2023
Historique:
received:
02
11
2022
accepted:
27
04
2023
medline:
11
5
2023
pubmed:
10
5
2023
entrez:
10
5
2023
Statut:
epublish
Résumé
Viruses in built environments (BEs) raise public health concerns, yet they are generally less studied than bacteria. To better understand viral dynamics in BEs, this study assesses viromes from 11 habitats across four types of BEs with low to high occupancy. The diversity, composition, metabolic functions, and lifestyles of the viromes are found to be habitat dependent. Caudoviricetes species are ubiquitous on surface habitats in the BEs, and some of them are distinct from those present in other environments. Antimicrobial resistance genes are identified in viruses inhabiting surfaces frequently touched by occupants and in viruses inhabiting occupants' skin. Diverse CRISPR/Cas immunity systems and anti-CRISPR proteins are found in bacterial hosts and viruses, respectively, consistent with the strongly coupled virus-host links. Evidence of viruses potentially aiding host adaptation in a specific-habitat manner is identified through a unique gene insertion. This work illustrates that virus-host interactions occur frequently in BEs and that viruses are integral members of BE microbiomes.
Identifiants
pubmed: 37160974
doi: 10.1038/s41467-023-38400-0
pii: 10.1038/s41467-023-38400-0
pmc: PMC10169181
doi:
Substances chimiques
BES
10191-18-1
Alkanesulfonic Acids
0
Types de publication
Journal Article
Research Support, Non-U.S. Gov't
Research Support, N.I.H., Extramural
Langues
eng
Sous-ensembles de citation
IM
Pagination
2676Subventions
Organisme : NIAID NIH HHS
ID : R01 AI151059
Pays : United States
Organisme : NIDA NIH HHS
ID : U01 DA053941
Pays : United States
Informations de copyright
© 2023. The Author(s).
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