Correlated Target Search by Vaccinia Virus Uracil-DNA Glycosylase, a DNA Repair Enzyme and a Processivity Factor of Viral Replication Machinery.

DNA repair correlated cleavage processivity protein targeting protein translocation random walk uracil–DNA glycosylase vaccinia virus viral replication

Journal

International journal of molecular sciences
ISSN: 1422-0067
Titre abrégé: Int J Mol Sci
Pays: Switzerland
ID NLM: 101092791

Informations de publication

Date de publication:
23 May 2023
Historique:
received: 20 04 2023
revised: 13 05 2023
accepted: 21 05 2023
medline: 12 6 2023
pubmed: 10 6 2023
entrez: 10 6 2023
Statut: epublish

Résumé

The protein encoded by the vaccinia virus

Identifiants

pubmed: 37298065
pii: ijms24119113
doi: 10.3390/ijms24119113
pmc: PMC10253040
pii:
doi:

Substances chimiques

Uracil-DNA Glycosidase EC 3.2.2.-
DNA 9007-49-2
Uracil 56HH86ZVCT
DNA, Viral 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Russian Science Foundation
ID : 21-64-00017
Organisme : Russian Ministry of Higher Education and Science
ID : 121031300056-8

Références

Nature. 1998 Jan 15;391(6664):251-8
pubmed: 9440688
Antimicrob Agents Chemother. 2014 Dec;58(12):7383-9
pubmed: 25267668
Biochem Biophys Res Commun. 2011 Oct 22;414(2):425-30
pubmed: 21971549
Proteins. 2006 Oct 1;65(1):231-8
pubmed: 16881051
J Virol. 2007 Feb;81(3):1195-208
pubmed: 17108049
J Virol. 1993 May;67(5):2503-12
pubmed: 8474156
Acta Naturae. 2015 Oct-Dec;7(4):113-21
pubmed: 26798498
Biochemistry. 2015 Jan 20;54(2):557-66
pubmed: 25495964
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Mar 1;69(Pt 3):295-301
pubmed: 23519808
J Biol Chem. 2002 Oct 18;277(42):39926-36
pubmed: 12161446
Nucleic Acids Res. 2015 Apr 30;43(8):4087-97
pubmed: 25845592
J Virol. 1997 Jul;71(7):4997-5002
pubmed: 9188564
Chem Rev. 2018 Dec 12;118(23):11298-11323
pubmed: 30379068
Acta Crystallogr F Struct Biol Commun. 2016 Sep;72(Pt 9):687-91
pubmed: 27599859
PLoS One. 2017 Sep 1;12(9):e0184162
pubmed: 28863186
J Biol Chem. 1987 Nov 25;262(33):16224-32
pubmed: 3316215
Chem Rev. 2003 Jul;103(7):2729-59
pubmed: 12848584
Dokl Biochem Biophys. 2011 Mar-Apr;437:94-7
pubmed: 21590385
Signal Transduct Target Ther. 2020 Sep 23;5(1):213
pubmed: 32968059
Biochemistry. 2012 Mar 13;51(10):2032-43
pubmed: 22320201
Biochemistry. 1995 Jan 10;34(1):128-38
pubmed: 7819187
Nat Struct Mol Biol. 2009 Dec;16(12):1224-9
pubmed: 19898474
Cold Spring Harb Perspect Biol. 2013 Sep 01;5(9):
pubmed: 23838441
BMC Struct Biol. 2007 Jul 02;7:45
pubmed: 17605817
J Biol Chem. 2015 Jul 17;290(29):17923-17934
pubmed: 26045555
Biochemistry. 2013 Apr 16;52(15):2536-44
pubmed: 23506270
J Virol. 2015 Mar;89(6):3366-79
pubmed: 25589640
Biochemistry. 2016 Sep 20;55(37):5230-42
pubmed: 27571472
FEBS Lett. 2008 Feb 6;582(3):410-4
pubmed: 18201572
J Biol Chem. 2011 Jul 15;286(28):24702-13
pubmed: 21572084
Acta Crystallogr Sect F Struct Biol Cryst Commun. 2013 Dec;69(Pt 12):1328-34
pubmed: 24316823
Biochemistry. 2008 May 13;47(19):5336-53
pubmed: 18422348
ACS Chem Biol. 2010 Apr 16;5(4):427-36
pubmed: 20201599
Biochemistry. 2013 Apr 16;52(15):2526-35
pubmed: 23506309
Free Radic Biol Med. 2017 Jun;107:170-178
pubmed: 27865982
Proc Natl Acad Sci U S A. 2008 Aug 5;105(31):10791-6
pubmed: 18669665
Virology. 1998 Sep 15;249(1):160-6
pubmed: 9740787
Mol Aspects Med. 2007 Jun-Aug;28(3-4):276-306
pubmed: 17590428
ACS Chem Biol. 2017 Sep 15;12(9):2260-2263
pubmed: 28787572
J Virol. 2010 Dec;84(23):12325-35
pubmed: 20861259
Biochemistry. 2008 Nov 4;47(44):11434-45
pubmed: 18839966
J Med Chem. 2013 Apr 25;56(8):3235-46
pubmed: 23527789
Mol Cell. 2000 Feb;5(2):267-78
pubmed: 10882068
J Biol Chem. 1988 Sep 5;263(25):12728-37
pubmed: 3045127
Biochemistry. 2019 Nov 12;58(45):4466-4479
pubmed: 31659895
mBio. 2018 Oct 30;9(5):
pubmed: 30377280
Biochemistry. 2007 Oct 23;46(42):11874-81
pubmed: 17910420
PLoS Pathog. 2014 Mar 06;10(3):e1003978
pubmed: 24603707
Nucleic Acids Res. 2017 Dec 1;45(21):12413-12424
pubmed: 29036472
Antiviral Res. 2019 Feb;162:178-185
pubmed: 30578797
J Biol Chem. 1994 Dec 9;269(49):31190-7
pubmed: 7983061
Nucleic Acids Res. 2003 Aug 15;31(16):4950-7
pubmed: 12907738
Protein Sci. 2016 Dec;25(12):2113-2131
pubmed: 27684934
J Virol. 2000 Aug;74(15):7039-47
pubmed: 10888643
Philos Trans R Soc Lond B Biol Sci. 2009 Mar 12;364(1517):563-8
pubmed: 19008197
Cell Mol Life Sci. 2008 May;65(10):1544-65
pubmed: 18259689
BMC Struct Biol. 2015 Jun 02;15:10
pubmed: 26031450
Nucleic Acids Res. 2014 Aug;42(14):9295-303
pubmed: 25016526
Biochemistry. 1981 Nov 24;20(24):6929-48
pubmed: 7317363
J Biol Chem. 2004 Jul 2;279(27):28419-25
pubmed: 15096517
Biochemistry. 1981 Nov 24;20(24):6948-60
pubmed: 6274381
J Virol. 2012 Mar;86(5):2533-44
pubmed: 22171270
J Biol Chem. 2006 Feb 10;281(6):3439-51
pubmed: 16326701
Nat Chem Biol. 2012 Jan 08;8(2):205-10
pubmed: 22231272
J Virol. 1994 Aug;68(8):4963-72
pubmed: 8035495
J Theor Biol. 2004 Jan 21;226(2):195-203
pubmed: 14643189
Molecules. 2021 Nov 03;26(21):
pubmed: 34771075
Biochemistry. 1999 Jan 19;38(3):952-63
pubmed: 9893991
Methods Enzymol. 1979;63:54-84
pubmed: 502869
Proc Natl Acad Sci U S A. 2010 Sep 21;107(38):16506-11
pubmed: 20823261
Int J Mol Sci. 2019 Sep 21;20(19):
pubmed: 31546611
J Virol. 2003 Jan;77(1):159-66
pubmed: 12477821
Elife. 2017 Mar 31;6:
pubmed: 28362256
J Biol Chem. 2013 Aug 23;288(34):24550-9
pubmed: 23839988
Annu Rev Virol. 2022 Sep 29;9(1):239-259
pubmed: 35584888
Science. 2019 Feb 22;363(6429):
pubmed: 30679383
J Virol. 2013 Feb;87(3):1679-89
pubmed: 23175373
Curr Issues Mol Biol. 2001 Jul;3(3):47-55
pubmed: 11488411
Science. 2023 Jan 6;379(6627):100-105
pubmed: 36520947
Virology. 1994 Feb;198(2):504-13
pubmed: 8291232
Cold Spring Harb Perspect Biol. 2013 Apr 01;5(4):a010165
pubmed: 23545418
Mutat Res. 2005 Sep 4;577(1-2):24-54
pubmed: 15939442
Biochemistry. 1981 Nov 24;20(24):6961-77
pubmed: 7032584
J Med Chem. 2011 May 12;54(9):3260-7
pubmed: 21438571
Biochemistry. 2008 Aug 26;47(34):8970-6
pubmed: 18672903
Mol Cell. 2004 Jul 23;15(2):233-44
pubmed: 15260974
Virology. 1997 Jul 21;234(1):168-75
pubmed: 9234958
Nat Rev Genet. 2017 Sep;18(9):517-534
pubmed: 28555658
Cell Mol Life Sci. 2018 Oct;75(20):3741-3750
pubmed: 30043138
J Virol. 1996 Nov;70(11):7965-73
pubmed: 8892920
Antimicrob Agents Chemother. 2011 Nov;55(11):5054-62
pubmed: 21844323
Nucleic Acids Res. 2004 Feb 18;32(3):1197-207
pubmed: 14973201

Auteurs

Evgeniia A Diatlova (EA)

SB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.

Grigory V Mechetin (GV)

SB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.

Anna V Yudkina (AV)

SB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.

Vasily D Zharkov (VD)

Biology Department, Tomsk State University, 634050 Tomsk, Russia.

Natalia A Torgasheva (NA)

SB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.

Anton V Endutkin (AV)

SB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.

Olga V Shulenina (OV)

NRC "Kurchatov Institute"-B. P. Konstantinov Petersburg Nuclear Physics Institute, Leningrad Region, 188300 Gatchina, Russia.

Andrey L Konevega (AL)

NRC "Kurchatov Institute"-B. P. Konstantinov Petersburg Nuclear Physics Institute, Leningrad Region, 188300 Gatchina, Russia.

Irina P Gileva (IP)

State Research Center of Virology and Biotechnology Vector, Novosibirsk Region, 630559 Koltsovo, Russia.

Sergei N Shchelkunov (SN)

State Research Center of Virology and Biotechnology Vector, Novosibirsk Region, 630559 Koltsovo, Russia.

Dmitry O Zharkov (DO)

SB RAS Institute of Chemical Biology and Fundamental Medicine, 8 Lavrentieva Ave., 630090 Novosibirsk, Russia.
Department of Natural Sciences, Novosibirsk State University, 2 Pirogova St., 630090 Novosibirsk, Russia.

Articles similaires

Genome, Viral Ralstonia Composting Solanum lycopersicum Bacteriophages
DNA Methylation Humans DNA Animals Machine Learning
DNA Glycosylases Nucleosomes Humans 8-Hydroxy-2'-Deoxyguanosine DNA Repair
Alleles Benchmarking Transcription Factors Humans Chromatin Immunoprecipitation Sequencing

Classifications MeSH