Symmetrical distributions of aminoacyl-tRNA synthetases during the evolution of the genetic code.
Amino-acyl-tRNA synthetases
Evolution genetic code
Extended RNA codes 1 and 2
Hypercubes
Polytopes
RNY code
Symmetry groups
Journal
Theory in biosciences = Theorie in den Biowissenschaften
ISSN: 1611-7530
Titre abrégé: Theory Biosci
Pays: Germany
ID NLM: 9708216
Informations de publication
Date de publication:
Sep 2023
Sep 2023
Historique:
received:
06
10
2022
accepted:
10
06
2023
medline:
14
8
2023
pubmed:
5
7
2023
entrez:
4
7
2023
Statut:
ppublish
Résumé
In this work, we formulate the following question: How the distribution of aminoacyl-tRNA synthetases (aaRSs) went from an ancestral bidirectional gene (mirror symmetry) to the symmetrical distribution of aaRSs in a six-dimensional hypercube of the Standard Genetic Code (SGC)? We assume a primeval RNY code, two Extended Genetic RNA codes type 1 and 2, and the SGC. We outline the types of symmetries of the distribution of aaRSs in each code. The symmetry groups of aaRSs in each code are described, until the symmetries of the SGC display a mirror symmetry. Considering both Extended RNA codes the 20 aaRSs were already present before the Last Universal Ancestor. These findings reveal intricacies in the diversification of aaRSs accompanied by the evolution of the genetic code.
Identifiants
pubmed: 37402895
doi: 10.1007/s12064-023-00394-0
pii: 10.1007/s12064-023-00394-0
pmc: PMC10423125
doi:
Substances chimiques
Amino Acyl-tRNA Synthetases
EC 6.1.1.-
RNA, Transfer
9014-25-9
RNA
63231-63-0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
211-219Subventions
Organisme : Dirección General de Asuntos del Personal Académico, Universidad Nacional Autónoma de México
ID : PAPIIT-IN224015
Informations de copyright
© 2023. The Author(s).
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