A critical evaluation of protein kinase regulation by activation loop autophosphorylation.

activation allostery biochemistry chemical biology dimerization inhibition kinase molecular biophysics phosphorylation structural biology

Journal

eLife
ISSN: 2050-084X
Titre abrégé: Elife
Pays: England
ID NLM: 101579614

Informations de publication

Date de publication:
20 07 2023
Historique:
received: 31 03 2023
accepted: 07 07 2023
medline: 21 7 2023
pubmed: 20 7 2023
entrez: 20 7 2023
Statut: epublish

Résumé

Phosphorylation of proteins is a ubiquitous mechanism of regulating their function, localization, or activity. Protein kinases, enzymes that use ATP to phosphorylate protein substrates are, therefore, powerful signal transducers in eukaryotic cells. The mechanism of phosphoryl-transfer is universally conserved among protein kinases, which necessitates the tight regulation of kinase activity for the orchestration of cellular processes with high spatial and temporal fidelity. In response to a stimulus, many kinases enhance their own activity by autophosphorylating a conserved amino acid in their activation loop, but precisely how this reaction is performed is controversial. Classically, kinases that autophosphorylate their activation loop are thought to perform the reaction in

Identifiants

pubmed: 37470698
doi: 10.7554/eLife.88210
pii: 88210
pmc: PMC10359097
doi:
pii:

Substances chimiques

Protein Kinases EC 2.7.-

Types de publication

Journal Article Research Support, Non-U.S. Gov't

Langues

eng

Sous-ensembles de citation

IM

Subventions

Organisme : Austrian Science Fund FWF
ID : P30584
Pays : Austria
Organisme : Austrian Science Fund FWF
ID : P33066
Pays : Austria
Organisme : Austrian Science Fund FWF
ID : W1261
Pays : Austria

Informations de copyright

© 2023, Reinhardt and Leonard.

Déclaration de conflit d'intérêts

RR, TL No competing interests declared

Références

J Biol Chem. 2021 Aug;297(2):100919
pubmed: 34181950
Nature. 2009 Feb 5;457(7230):687-93
pubmed: 19079236
PLoS Biol. 2010 Jul 27;8(7):e1000426
pubmed: 20668654
FEBS Lett. 2018 Jul;592(14):2432-2443
pubmed: 29933512
Biochem J. 2004 Jan 1;377(Pt 1):249-55
pubmed: 14570592
Structure. 2016 Jun 7;24(6):851-61
pubmed: 27133022
J Cell Sci. 2008 Jul 15;121(Pt 14):2339-49
pubmed: 18577575
Sci Signal. 2009 Feb 17;2(58):ra6
pubmed: 19224897
Proc Natl Acad Sci U S A. 2018 Apr 24;115(17):E3940-E3949
pubmed: 29632185
J Biol Chem. 2009 Jun 12;284(24):16354-16368
pubmed: 19369251
Cell. 2015 Oct 22;163(3):712-23
pubmed: 26496610
Mol Cell Proteomics. 2003 Oct;2(10):1055-67
pubmed: 12885952
Mol Cell. 2001 Mar;7(3):615-26
pubmed: 11463386
Proc Natl Acad Sci U S A. 2019 May 28;116(22):10798-10803
pubmed: 31076553
Sci Rep. 2019 Dec 24;9(1):19790
pubmed: 31875044
Nature. 2022 May;605(7910):551-560
pubmed: 35332283
Acta Crystallogr D Biol Crystallogr. 2011 May;67(Pt 5):423-8
pubmed: 21543844
Nat Methods. 2019 Jul;16(7):587-594
pubmed: 31249407
PLoS One. 2011;6(9):e24825
pubmed: 21949762
Structure. 2011 Dec 7;19(12):1752-61
pubmed: 22153498
Proc Natl Acad Sci U S A. 2006 Nov 21;103(47):17783-8
pubmed: 17095602
Annu Rev Cell Dev Biol. 2012;28:251-77
pubmed: 23057742
J Biol Chem. 1992 Sep 25;267(27):19521-8
pubmed: 1326556
Mol Cell. 2009 Nov 25;36(4):560-70
pubmed: 19941817
Annu Rev Biochem. 2012;81:587-613
pubmed: 22482904
Nat Rev Mol Cell Biol. 2010 Jan;11(1):9-22
pubmed: 20027184
Cell. 2005 Dec 2;123(5):849-60
pubmed: 16325579
Structure. 2023 Mar 2;31(3):343-354.e3
pubmed: 36758543
J Biol Chem. 2005 Jul 1;280(26):24339-46
pubmed: 15860459
J Med Chem. 2018 Sep 27;61(18):8120-8135
pubmed: 30137981
Curr Biol. 2003 Apr 15;13(8):691-7
pubmed: 12699628
Chem Biol Drug Des. 2010 Aug;76(2):100-6
pubmed: 20545947
Proc Natl Acad Sci U S A. 2008 Sep 23;105(38):14377-82
pubmed: 18787129
Biochemistry. 2019 Jul 9;58(27):2967-2977
pubmed: 31246429
Trends Biochem Sci. 2016 Nov;41(11):938-953
pubmed: 27594179
Open Biol. 2018 Sep;8(9):
pubmed: 30185601
Nat Struct Biol. 2002 Apr;9(4):273-7
pubmed: 11896404
Structure. 2019 Jan 2;27(1):125-133.e4
pubmed: 30503777
J Mol Biol. 2005 Sep 2;351(5):1110-22
pubmed: 16054648
Proc Natl Acad Sci U S A. 2007 Jan 23;104(4):1272-7
pubmed: 17227859
Mol Cell. 2003 Oct;12(4):851-62
pubmed: 14580337
Nat Commun. 2015 Dec 01;6:10029
pubmed: 26620183
J Mol Biol. 2006 Aug 11;361(2):312-26
pubmed: 16837009
J Mol Biol. 2016 Jan 16;428(1):121-141
pubmed: 26582574
Cell. 2006 Jun 16;125(6):1137-49
pubmed: 16777603
J Biol Chem. 2014 Feb 28;289(9):5747-57
pubmed: 24338483
Biochemistry. 1991 Aug 6;30(31):7740-6
pubmed: 1651107
Structure. 2020 Oct 6;28(10):1101-1113.e5
pubmed: 32649858
Cancer Cell. 2014 Sep 8;26(3):402-413
pubmed: 25155755
Cell. 2003 Mar 21;112(6):845-57
pubmed: 12654250
Proc Natl Acad Sci U S A. 2004 Apr 27;101(17):6445-9
pubmed: 15096590
Nat Nanotechnol. 2016 May 5;11(5):409-20
pubmed: 27146955
Nature. 2019 Nov;575(7783):545-550
pubmed: 31581174
Nat Methods. 2021 Oct;18(10):1247-1252
pubmed: 34608319
Nat Chem Biol. 2020 Mar;16(3):267-277
pubmed: 31959966
Mol Cell. 2002 Jun;9(6):1227-40
pubmed: 12086620
Cell. 2021 Jan 7;184(1):18-32
pubmed: 33417859
Protein Sci. 2017 Feb;26(2):152-162
pubmed: 27727493
J Biol Chem. 1989 Nov 5;264(31):18701-6
pubmed: 2808393
Nature. 1998 Oct 29;395(6705):863-9
pubmed: 9804419
Cell. 2008 Jan 11;132(1):89-100
pubmed: 18191223
Bioessays. 2015 Sep;37(9):959-67
pubmed: 26241732
J Biol Chem. 2019 Aug 30;294(35):13186-13197
pubmed: 31331936
Structure. 2023 Apr 6;31(4):435-446.e4
pubmed: 36854301
FASEB J. 2006 Jun;20(8):1142-51
pubmed: 16770013
Nature. 2017 Mar 30;543(7647):733-737
pubmed: 28329763
Nat Commun. 2015 Jun 10;6:7380
pubmed: 26060020
J Mol Biol. 2001 Aug 31;311(5):1011-26
pubmed: 11531336
J Biol Chem. 2012 Oct 26;287(44):36651-61
pubmed: 22969083
Structure. 2006 Mar;14(3):589-600
pubmed: 16531242
Protein Sci. 2009 Apr;18(4):782-91
pubmed: 19309729
J Biol Chem. 2015 Jun 19;290(25):15538-15548
pubmed: 25925954
Science. 2003 May 23;300(5623):1256-62
pubmed: 12764189
N Engl J Med. 2019 Dec 12;381(24):2315-2326
pubmed: 31826340
Redox Biol. 2020 Jan;28:101318
pubmed: 31546169
Cell. 2005 Jun 17;121(6):925-36
pubmed: 15960979
Biochemistry. 2015 Aug 18;54(32):5063-71
pubmed: 26208601
Sci Signal. 2020 Jan 28;13(616):
pubmed: 31992581
Nature. 2021 Aug;596(7873):583-589
pubmed: 34265844
Cell. 2000 Aug 4;102(3):387-97
pubmed: 10975528
Nature. 2011 Apr 21;472(7343):325-30
pubmed: 21423167
Science. 2022 Jan 21;375(6578):eabj7662
pubmed: 35050655
J Med Chem. 2015 Sep 24;58(18):7431-48
pubmed: 26355916
Science. 2017 Mar 24;355(6331):
pubmed: 28336611
Curr Opin Struct Biol. 2021 Aug;69:78-85
pubmed: 33930613
Mol Cell Proteomics. 2014 Dec;13(12):3497-506
pubmed: 25225357
Cell Rep. 2013 Mar 28;3(3):747-58
pubmed: 23453972
Elife. 2014 May 27;3:e02667
pubmed: 24867643
Elife. 2021 Jul 30;10:
pubmed: 34328418
Proc Natl Acad Sci U S A. 2023 Feb 14;120(7):e2212909120
pubmed: 36745811
J Biol Chem. 2008 Jul 11;283(28):19511-20
pubmed: 18482985
J Comput Chem. 2010 Jan 15;31(1):133-43
pubmed: 19421996
Nature. 2019 May;569(7758):718-722
pubmed: 31118511
Nat Commun. 2019 Mar 4;10(1):1032
pubmed: 30833564
Annu Rev Biochem. 2011;80:669-702
pubmed: 21513457
J Biol Chem. 2004 Jun 4;279(23):24444-51
pubmed: 15067004
EMBO J. 2008 Jul 23;27(14):1985-94
pubmed: 18566589
Proc Natl Acad Sci U S A. 2021 Aug 17;118(33):
pubmed: 34385319
J Biol Chem. 2019 Sep 27;294(39):14422-14441
pubmed: 31406020
Nature. 1997 Feb 13;385(6617):602-9
pubmed: 9024658
J Mol Biol. 2011 Jun 10;409(3):369-83
pubmed: 21497605
Mol Cell. 2002 Jan;9(1):73-83
pubmed: 11804587
Sci Signal. 2013 Jul 02;6(282):ra54
pubmed: 23821772
Sci Signal. 2020 Jan 28;13(616):
pubmed: 31992583
Nature. 2020 Jan;577(7792):706-710
pubmed: 31942072
Nat Commun. 2022 Apr 6;13(1):1874
pubmed: 35387990
Mol Cell. 2009 Sep 24;35(6):818-29
pubmed: 19782031
Biochem Biophys Res Commun. 2007 Jan 19;352(3):609-16
pubmed: 17141195
Sci Signal. 2015 Dec 01;8(405):rs13
pubmed: 26628682
Cell. 2005 Sep 23;122(6):887-900
pubmed: 16179258
Mol Cell. 2005 Apr 29;18(3):379-91
pubmed: 15866179
Cell. 2002 May 3;109(3):275-82
pubmed: 12015977
Biochem J. 2004 Dec 1;384(Pt 2):255-62
pubmed: 15291762
Acta Crystallogr D Biol Crystallogr. 2010 May;66(Pt 5):577-83
pubmed: 20445233
Nat Methods. 2021 Oct;18(10):1239-1246
pubmed: 34608318
Sci Signal. 2020 Jul 07;13(639):
pubmed: 32636306
Cell. 2004 Mar 19;116(6):855-67
pubmed: 15035987
Protein Sci. 2018 Feb;27(2):485-497
pubmed: 29098736
Nature. 2009 Sep 24;461(7263):542-5
pubmed: 19727074
Mol Cell. 2004 Sep 10;15(5):661-75
pubmed: 15350212
EMBO J. 2008 Feb 20;27(4):704-14
pubmed: 18239682
Cell. 2003 Mar 21;112(6):859-71
pubmed: 12654251
Nature. 1994 Jun 16;369(6481):581-4
pubmed: 8202162
Sci Signal. 2020 Jul 21;13(641):
pubmed: 32694171
Sci Rep. 2017 Dec 12;7(1):17405
pubmed: 29234112
EMBO J. 2007 May 2;26(9):2251-61
pubmed: 17446865
Anal Biochem. 2020 Mar 15;593:113608
pubmed: 32007473
Mol Cell. 2014 Sep 18;55(6):891-903
pubmed: 25201411
Science. 2017 Jun 23;356(6344):1288-1293
pubmed: 28642438
Elife. 2015 Feb 20;4:
pubmed: 25699547
Nature. 1997 Feb 13;385(6617):595-602
pubmed: 9024657
Nat Struct Mol Biol. 2022 Oct;29(10):990-999
pubmed: 36202993
ACS Nano. 2019 May 28;13(5):5015-5027
pubmed: 30990672
Science. 2004 May 28;304(5675):1325-8
pubmed: 15166380
Sci Adv. 2019 Mar 20;5(3):eaav0482
pubmed: 30906862
Biochemistry. 2020 May 5;59(17):1688-1700
pubmed: 32250593
Protein Sci. 2020 Jun;29(6):1524-1534
pubmed: 32282091
Cell. 1996 Apr 19;85(2):149-58
pubmed: 8612268
Cell. 2001 Feb 9;104(3):409-20
pubmed: 11239398
Biochem J. 2016 Oct 1;473(19):3159-75
pubmed: 27444646
Cell. 2005 Sep 23;122(6):901-13
pubmed: 16179259
Cell. 2007 Sep 21;130(6):1032-43
pubmed: 17889648
Nature. 2023 Jan;613(7945):759-766
pubmed: 36631611
Curr Protoc Protein Sci. 2018 Aug;93(1):e64
pubmed: 30044546
Proc Natl Acad Sci U S A. 2017 Dec 19;114(51):13507-13512
pubmed: 29208712
EMBO J. 2006 Jul 12;25(13):3179-90
pubmed: 16794575
Cell. 1996 Mar 22;84(6):875-87
pubmed: 8601311
Science. 1991 Jul 26;253(5018):414-20
pubmed: 1862343
Nat Methods. 2020 Jul;17(7):665-680
pubmed: 32483333
Trends Biochem Sci. 2018 May;43(5):380-394
pubmed: 29544874
Trends Biochem Sci. 2007 Aug;32(8):351-6
pubmed: 17627826
J Biol Chem. 1992 Jun 25;267(18):12452-61
pubmed: 1352286
EMBO J. 2008 Dec 3;27(23):3175-85
pubmed: 18946488
Nature. 2019 Mar;567(7748):394-398
pubmed: 30842653
Chem Rev. 2022 Apr 27;122(8):7327-7385
pubmed: 34449207
ACS Chem Neurosci. 2023 Jun 7;14(11):1971-1980
pubmed: 37200505
Cell Rep. 2013 Mar 28;3(3):734-46
pubmed: 23453971
Nat Struct Biol. 2002 Dec;9(12):940-4
pubmed: 12434148
J Biol Chem. 2008 Dec 19;283(51):36019-30
pubmed: 18948271
Nature. 1994 Dec 22-29;372(6508):746-54
pubmed: 7997262
Cell Signal. 2014 Sep;26(9):1825-36
pubmed: 24815189
J Biol Chem. 2001 Aug 31;276(35):32606-15
pubmed: 11410586
Elife. 2022 Jun 22;11:
pubmed: 35730415
Annu Rev Phys Chem. 2015 Apr;66:453-74
pubmed: 25594852

Auteurs

Ronja Reinhardt (R)

Max Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria.
Medical University of Vienna, Center for Medical Biochemistry, Vienna, Austria.

Thomas A Leonard (TA)

Max Perutz Labs, Vienna Biocenter Campus (VBC), Vienna, Austria.
Medical University of Vienna, Center for Medical Biochemistry, Vienna, Austria.

Articles similaires

Animals TOR Serine-Threonine Kinases Colorectal Neoplasms Colitis Mice

The FGF/FGFR/c-Myc axis as a promising therapeutic target in multiple myeloma.

Arianna Giacomini, Sara Taranto, Giorgia Gazzaroli et al.
1.00
Humans Multiple Myeloma Receptors, Fibroblast Growth Factor Fibroblast Growth Factors Proto-Oncogene Proteins c-myc
Animals Lung India Sheep Transcriptome

Calcineurin inhibition enhances

Priyanka Das, Alejandro Aballay, Jogender Singh
1.00
Animals Caenorhabditis elegans Longevity Caenorhabditis elegans Proteins Calcineurin

Classifications MeSH