Toward Precision Oncology in Glioblastoma with a Personalized Cancer Genome Reporting Tool and Genetic Changes Identified by Whole Exome Sequencing.


Journal

Omics : a journal of integrative biology
ISSN: 1557-8100
Titre abrégé: OMICS
Pays: United States
ID NLM: 101131135

Informations de publication

Date de publication:
09 2023
Historique:
medline: 15 9 2023
pubmed: 5 9 2023
entrez: 5 9 2023
Statut: ppublish

Résumé

Precision/personalized medicine in oncology has two key pillars: molecular profiling of the tumors and personalized reporting of the results in ways that are clinically contextualized and triangulated. Moreover, neurosurgery as a field stands to benefit from precision/personalized medicine and new tools for reporting of the molecular findings. In this context, glioblastoma (GBM) is a highly aggressive brain tumor with limited treatment options and poor prognosis. Precision/personalized medicine has emerged as a promising approach for personalized therapy in GBM. In this study, we performed whole exome sequencing of tumor tissue samples from six newly diagnosed GBM patients and matched nontumor control samples. We report here the genetic alterations identified in the tumors, including single nucleotide variations, insertions or deletions (indels), and copy number variations, and attendant mutational signatures. Additionally, using a personalized cancer genome-reporting tool, we linked genomic information to potential therapeutic targets and treatment options for each patient. Our findings revealed heterogeneity in genetic alterations and identified targetable pathways, such as the

Identifiants

pubmed: 37669106
doi: 10.1089/omi.2023.0117
doi:

Substances chimiques

Phosphatidylinositol 3-Kinases EC 2.7.1.-

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

426-433

Auteurs

Onur Erdogan (O)

Department of Neurosurgery, School of Medicine, Marmara University, Istanbul, Turkey.
Institute of Neurological Sciences, Marmara University, Istanbul, Turkey.

Şeyma Çolakoğlu Özkaya (ŞÇ)

Department of Medical Biology and Genetics, Institute of Health Sciences, Marmara University, Istanbul, Turkey.

Can Erzik (C)

Department of Medical Biology, School of Medicine, Marmara University, Istanbul, Turkey.

Kaya Bilguvar (K)

Department of Neurosurgery and Genetics, Yale Center for Genome Analysis, Yale School of Medicine, New Haven, Connecticut, USA.
Department of Medical Biology, School of Medicine, Acibadem Mehmet Ali Aydinlar University, Istanbul, Turkey.

Kazım Yalçın Arga (KY)

Department of Bioengineering, Faculty of Engineering, Marmara University, Istanbul, Turkey.
Health Biotechnology Joint Research and Application Center of Excellence, Istanbul, Turkey.

Fatih Bayraklı (F)

Department of Neurosurgery, School of Medicine, Marmara University, Istanbul, Turkey.
Institute of Neurological Sciences, Marmara University, Istanbul, Turkey.

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Classifications MeSH