A Data Deposition Platform for Sharing Nuclear Magnetic Resonance Data.

Databases, Factual Biological Products Magnetic Resonance Spectroscopy

Journal

Journal of natural products
ISSN: 1520-6025
Titre abrégé: J Nat Prod
Pays: United States
ID NLM: 7906882

Informations de publication

Date de publication:
24 Nov 2023
Historique:
medline: 27 11 2023
pubmed: 7 11 2023
entrez: 7 11 2023
Statut: ppublish

Résumé

Nuclear magnetic resonance (NMR) data are rarely deposited in open databases, leading to loss of critical scientific knowledge. Existing data reporting methods (images, tables, lists of values) contain less information than raw data and are poorly standardized. Together, these issues limit FAIR (findable, accessible, interoperable, reusable) access to these data, which in turn creates barriers for compound dereplication and the development of new data-driven discovery tools. Existing NMR databases either are not designed for natural products data or employ complex deposition interfaces that disincentivize deposition. Journals, including the

Identifiants

DOI: 10.1021/acs.jnatprod.3c00795 PMID: 37935005
pubmed: 37935005
doi: 10.1021/acs.jnatprod.3c00795
doi:

Substances chimiques

Biological Products 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

2554-2561

Auteurs

Matthew Pin (M)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
ORCID: 0009-0001-9069-0943

Ella F Poynton (EF)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.

Tamara Jordan (T)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.

Jonghyeok Kim (J)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.

Benjamin Ledingham (B)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.

Jeffrey A van Santen (JA)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
Unnatural Products, 2161 Delaware Avenue Suite A, Santa Cruz, California 95060, United States.
ORCID: 0000-0002-5424-804X

Vera Yang (V)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.

Andrew Maras (A)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.

Pegah Tavangar (P)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.

Vasuk Gautam (V)

Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.

Harrison Peters (H)

Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.

Tanvir Sajed (T)

Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.

Brian L Lee (BL)

Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.

Hailey A Shreffler (HA)

Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, United States.

James T Koller (JT)

Interdisciplinary Plant Group, MU Metabolomics Center, Bond Life Sciences Center, Department of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States.

Zachary M Tretter (ZM)

Interdisciplinary Plant Group, MU Metabolomics Center, Bond Life Sciences Center, Department of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States.

John R Cort (JR)

Earth and Biological Sciences Directorate, Pacific Northwest National Laboratory, Richland, Washington 99354, United States.
ORCID: 0000-0001-6342-6461

Lloyd W Sumner (LW)

Interdisciplinary Plant Group, MU Metabolomics Center, Bond Life Sciences Center, Department of Biochemistry, University of Missouri, Columbia, Missouri 65211, United States.
ORCID: 0000-0002-4086-663X

David S Wishart (DS)

Department of Biological Sciences, University of Alberta, Edmonton, AB T6G 2E9, Canada.
ORCID: 0000-0002-3207-2434

Roger G Linington (RG)

Department of Chemistry, Simon Fraser University, 8888 University Drive, Burnaby, BC V5A 1S6, Canada.
ORCID: 0000-0003-1818-4971

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Classifications MeSH

questionsmedicales.fr › Sciences de l'information › Mémorisation et recherche des informations › Bases de données comme sujet › Bases de données factuelles › A Data Deposition Platform for Sharing Nuclear...
questionsmedicales.fr › Mélanges complexes › Produits biologiques › A Data Deposition Platform for Sharing Nuclear...
questionsmedicales.fr › Techniques d'investigation › Techniques de chimie analytique › Analyse spectrale › Spectroscopie par résonance magnétique › A Data Deposition Platform for Sharing Nuclear...