Complete genome sequence of Bacillus cereus Z4, a biocontrol agent against tobacco black shank, isolated from the Western Pacific Ocean.


Journal

Marine genomics
ISSN: 1876-7478
Titre abrégé: Mar Genomics
Pays: Netherlands
ID NLM: 101475200

Informations de publication

Date de publication:
Dec 2023
Historique:
received: 11 08 2023
revised: 07 10 2023
accepted: 08 10 2023
medline: 28 11 2023
pubmed: 27 11 2023
entrez: 26 11 2023
Statut: ppublish

Résumé

Bacillus species have been considered as promising biological control agents due to their excellent antimicrobial ability. Bacillus cereus strain Z4 was isolated from 2000 m deep sea sediments of the Western Pacific Ocean, which possesses significant antifungal activity against Phytophthora nicotianae, the pathogenic fungus of tobacco black shank disease. To reveal the underlying antifungal genetic mechanisms, here, we report the complete genomic sequence of the strain Z4. The genome has one circular chromosome of 5,664,309 bp with a G + C content of 35.31%, 109 tRNAs, and 43 rRNAs. Genomic analysis identified 10 gene clusters related to the biosynthesis of biocontrol active compounds, including bacillibactin, petrobactin, fengycin, and molybdenum cofactor. Meanwhile, 6 gene clusters were responsible for the biosynthesis of metabolites with unknown functions. Strain Z4 also contains a large number of genes encoding carbohydrate-active enzymes and secreted proteins, respectively. The whole genomic analysis of Bacillus cereus Z4 may provide a valuable reference for elucidating its biocontrol mechanism against tobacco black shank.

Identifiants

pubmed: 38008533
pii: S1874-7787(23)00063-6
doi: 10.1016/j.margen.2023.101071
pii:
doi:

Substances chimiques

Antifungal Agents 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

101071

Informations de copyright

Copyright © 2023. Published by Elsevier B.V.

Déclaration de conflit d'intérêts

Declaration of Competing Interest None.

Auteurs

Shunhua Ji (S)

Technology Center, China Tobacco Fujian Industrial Co., Ltd., Xiamen 361021, Fujian, China.

Yin Tian (Y)

Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, Fujian, China.

Jingjing Li (J)

Technology Center, China Tobacco Fujian Industrial Co., Ltd., Xiamen 361021, Fujian, China.

Guangxin Xu (G)

Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, Fujian, China.

Yongan Zhang (Y)

Technology Center, China Tobacco Fujian Industrial Co., Ltd., Xiamen 361021, Fujian, China.

Shanyi Chen (S)

Technology Center, China Tobacco Fujian Industrial Co., Ltd., Xiamen 361021, Fujian, China.

Yiqiang Chen (Y)

Technology Center, China Tobacco Fujian Industrial Co., Ltd., Xiamen 361021, Fujian, China.

Xixiang Tang (X)

Key Laboratory of Marine Genetic Resources, Third Institute of Oceanography, Ministry of Natural Resources, Xiamen 361005, Fujian, China. Electronic address: tangxixiang@tio.org.cn.

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Classifications MeSH