Cytoplasmic fluidization contributes to breaking spore dormancy in fission yeast.


Journal

Proceedings of the National Academy of Sciences of the United States of America
ISSN: 1091-6490
Titre abrégé: Proc Natl Acad Sci U S A
Pays: United States
ID NLM: 7505876

Informations de publication

Date de publication:
25 Jun 2024
Historique:
medline: 18 6 2024
pubmed: 18 6 2024
entrez: 18 6 2024
Statut: ppublish

Résumé

The cytoplasm is a complex, crowded environment that influences myriad cellular processes including protein folding and metabolic reactions. Recent studies have suggested that changes in the biophysical properties of the cytoplasm play a key role in cellular homeostasis and adaptation. However, it still remains unclear how cells control their cytoplasmic properties in response to environmental cues. Here, we used fission yeast spores as a model system of dormant cells to elucidate the mechanisms underlying regulation of the cytoplasmic properties. By tracking fluorescent tracer particles, we found that particle mobility decreased in spores compared to vegetative cells and rapidly increased at the onset of dormancy breaking upon glucose addition. This cytoplasmic fluidization depended on glucose-sensing via the cyclic adenosine monophosphate-protein kinase A pathway. PKA activation led to trehalose degradation through trehalase Ntp1, thereby increasing particle mobility as the amount of trehalose decreased. In contrast, the rapid cytoplasmic fluidization did not require de novo protein synthesis, cytoskeletal dynamics, or cell volume increase. Furthermore, the measurement of diffusion coefficients with tracer particles of different sizes suggests that the spore cytoplasm impedes the movement of larger protein complexes (40 to 150 nm) such as ribosomes, while allowing free diffusion of smaller molecules (~3 nm) such as second messengers and signaling proteins. Our experiments have thus uncovered a series of signaling events that enable cells to quickly fluidize the cytoplasm at the onset of dormancy breaking.

Identifiants

pubmed: 38889144
doi: 10.1073/pnas.2405553121
doi:

Substances chimiques

Trehalose B8WCK70T7I
Glucose IY9XDZ35W2
Cyclic AMP-Dependent Protein Kinases EC 2.7.11.11
Schizosaccharomyces pombe Proteins 0

Types de publication

Journal Article

Langues

eng

Sous-ensembles de citation

IM

Pagination

e2405553121

Subventions

Organisme : MEXT | Japan Society for the Promotion of Science (JSPS)
ID : 18H02444 19H05798 and 22H02625
Organisme : MEXT | Japan Society for the Promotion of Science (JSPS)
ID : 19K16050 and 22K15110
Organisme : MEXT | Japan Society for the Promotion of Science (JSPS)
ID : 22J10844
Organisme : MEXT | Japan Society for the Promotion of Science (JSPS)
ID : 19H05675
Organisme : MEXT | JST | ACT-X
ID : JPMJAX22B8

Déclaration de conflit d'intérêts

Competing interests statement:The authors declare no competing interest.

Auteurs

Keiichiro Sakai (K)

Quantitative Biology Research Group, Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Division of Quantitative Biology, National Institute for Basic Biology, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.

Yohei Kondo (Y)

Quantitative Biology Research Group, Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Division of Quantitative Biology, National Institute for Basic Biology, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Division of Integrated Life Science, Department of Gene Mechanisms, Laboratory of Cell Cycle Regulation, Graduate School of Biostudies, Kyoto University, Kyoto 606-8315, Japan.
Center for Living Systems Information Science, Graduate School of Biostudies, Kyoto University, Kyoto 606-8315, Japan.

Yuhei Goto (Y)

Quantitative Biology Research Group, Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Division of Quantitative Biology, National Institute for Basic Biology, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Division of Integrated Life Science, Department of Gene Mechanisms, Laboratory of Cell Cycle Regulation, Graduate School of Biostudies, Kyoto University, Kyoto 606-8315, Japan.
Center for Living Systems Information Science, Graduate School of Biostudies, Kyoto University, Kyoto 606-8315, Japan.

Kazuhiro Aoki (K)

Quantitative Biology Research Group, Exploratory Research Center on Life and Living Systems, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Division of Quantitative Biology, National Institute for Basic Biology, National Institutes of Natural Sciences, Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Department of Basic Biology, School of Life Science, SOKENDAI (The Graduate University for Advanced Studies), Myodaiji-cho, Okazaki, Aichi 444-8787, Japan.
Division of Integrated Life Science, Department of Gene Mechanisms, Laboratory of Cell Cycle Regulation, Graduate School of Biostudies, Kyoto University, Kyoto 606-8315, Japan.
Center for Living Systems Information Science, Graduate School of Biostudies, Kyoto University, Kyoto 606-8315, Japan.

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Classifications MeSH