Microplastics Biodegradation by Estuarine and Landfill Microbiomes.
Biodegradation, Environmental
Microbiota
Microplastics
/ metabolism
Waste Disposal Facilities
Bacteria
/ classification
Water Pollutants, Chemical
/ metabolism
Polyesters
/ metabolism
Geologic Sediments
/ microbiology
RNA, Ribosomal, 16S
/ genetics
Estuaries
Polyethylene
/ metabolism
Polyethylene Terephthalates
/ metabolism
Biodegradation
Estuarine sediment
Landfill leachate
PCL
PE
PET
Journal
Microbial ecology
ISSN: 1432-184X
Titre abrégé: Microb Ecol
Pays: United States
ID NLM: 7500663
Informations de publication
Date de publication:
28 Jun 2024
28 Jun 2024
Historique:
received:
01
03
2024
accepted:
10
06
2024
medline:
29
6
2024
pubmed:
29
6
2024
entrez:
28
6
2024
Statut:
epublish
Résumé
Plastic pollution poses a worldwide environmental challenge, affecting wildlife and human health. Assessing the biodegradation capabilities of natural microbiomes in environments contaminated with microplastics is crucial for mitigating the effects of plastic pollution. In this work, we evaluated the potential of landfill leachate (LL) and estuarine sediments (ES) to biodegrade polyethylene (PE), polyethylene terephthalate (PET), and polycaprolactone (PCL), under aerobic, anaerobic, thermophilic, and mesophilic conditions. PCL underwent extensive aerobic biodegradation with LL (99 ± 7%) and ES (78 ± 3%) within 50-60 days. Under anaerobic conditions, LL degraded 87 ± 19% of PCL in 60 days, whereas ES showed minimal biodegradation (3 ± 0.3%). PE and PET showed no notable degradation. Metataxonomics results (16S rRNA sequencing) revealed the presence of highly abundant thermophilic microorganisms assigned to Coprothermobacter sp. (6.8% and 28% relative abundance in anaerobic and aerobic incubations, respectively). Coprothermobacter spp. contain genes encoding two enzymes, an esterase and a thermostable monoacylglycerol lipase, that can potentially catalyze PCL hydrolysis. These results suggest that Coprothermobacter sp. may be pivotal in landfill leachate microbiomes for thermophilic PCL biodegradation across varying conditions. The anaerobic microbial community was dominated by hydrogenotrophic methanogens assigned to Methanothermobacter sp. (21%), pointing at possible syntrophic interactions with Coprothermobacter sp. (a H
Identifiants
pubmed: 38943017
doi: 10.1007/s00248-024-02399-8
pii: 10.1007/s00248-024-02399-8
doi:
Substances chimiques
Microplastics
0
Water Pollutants, Chemical
0
Polyesters
0
RNA, Ribosomal, 16S
0
Polyethylene
9002-88-4
polycaprolactone
24980-41-4
Polyethylene Terephthalates
0
Types de publication
Journal Article
Langues
eng
Sous-ensembles de citation
IM
Pagination
88Subventions
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : Fundação para a Ciência e a Tecnologia
ID : 2023.01617.BD
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : Fundação para a Ciência e a Tecnologia
ID : UIDB/04469/2020 unit, with DOI 10.54499/UIDB/04469/2020
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Organisme : European Regional Development Fund
ID : NORTE-01-0145-FEDER-000080
Informations de copyright
© 2024. The Author(s).
Références
Rana KI (2019) Usage of potential micro-organisms for degradation of plastics. Open J Environ Biol 007–015. https://doi.org/10.17352/ojeb.000010
Taghavi N, Udugama IA, Zhuang W-Q, Baroutian S (2021) Challenges in biodegradation of non-degradable thermoplastic waste: from environmental impact to operational readiness. Biotechnol Adv 49:107731. https://doi.org/10.1016/j.biotechadv.2021.107731
doi: 10.1016/j.biotechadv.2021.107731
pubmed: 33785376
Rochman CM, Hoh E, Hentschel BT, Kaye S (2013) Long-term field measurement of sorption of organic contaminants to five types of plastic pellets: implications for plastic marine debris. Environ Sci Technol 47:1646–1654. https://doi.org/10.1021/es303700s
doi: 10.1021/es303700s
pubmed: 23270427
Yan F, Wei R, Cui Q et al (2021) Thermophilic whole-cell degradation of polyethylene terephthalate using engineered Clostridium thermocellum. Microb Biotechnol 14:374–385. https://doi.org/10.1111/1751-7915.13580
doi: 10.1111/1751-7915.13580
pubmed: 32343496
Battista F, Frison N, Bolzonella D (2021) Can bioplastics be treated in conventional anaerobic digesters for food waste treatment? Environ Technol Innov 22:101393. https://doi.org/10.1016/j.eti.2021.101393
doi: 10.1016/j.eti.2021.101393
Yu C, Dongsu B, Tao Z et al (2023) Anaerobic co-digestion of three commercial bio-plastic bags with food waste: effects on methane production and microbial community structure. Sci Total Environ 859:159967. https://doi.org/10.1016/j.scitotenv.2022.159967
doi: 10.1016/j.scitotenv.2022.159967
pubmed: 36347286
Li Y, Tao L, Wang Q et al (2023) Potential health impact of microplastics: a review of environmental distribution, human exposure, and toxic effects. Environ Health 1:249–257. https://doi.org/10.1021/envhealth.3c00052
doi: 10.1021/envhealth.3c00052
Zhu L, Kang Y, Ma M et al (2024) Tissue accumulation of microplastics and potential health risks in human. Sci Total Environ 915:170004. https://doi.org/10.1016/j.scitotenv.2024.170004
doi: 10.1016/j.scitotenv.2024.170004
pubmed: 38220018
Gómez EF, Michel FC (2013) Biodegradability of conventional and bio-based plastics and natural fiber composites during composting, anaerobic digestion and long-term soil incubation. Polym Degrad Stab 98:2583–2591. https://doi.org/10.1016/j.polymdegradstab.2013.09.018
doi: 10.1016/j.polymdegradstab.2013.09.018
Fernandes M, Salvador A, Alves MM, Vicente AA (2020) Factors affecting polyhydroxyalkanoates biodegradation in soil. Polym Degrad Stab 182:109408. https://doi.org/10.1016/j.polymdegradstab.2020.109408
doi: 10.1016/j.polymdegradstab.2020.109408
Ahmed T, Shahid M, Azeem F et al (2018) Biodegradation of plastics: current scenario and future prospects for environmental safety. Environ Sci Pollut Res 25:7287–7298. https://doi.org/10.1007/s11356-018-1234-9
doi: 10.1007/s11356-018-1234-9
Attallah OA, Mojicevic M, Garcia EL et al (2021) Macro and micro routes to high performance bioplastics: bioplastic biodegradability and mechanical and barrier properties. Polym (Basel) 13:2155. https://doi.org/10.3390/polym13132155
doi: 10.3390/polym13132155
Wilkes RA, Aristilde L (2017) Degradation and metabolism of synthetic plastics and associated products by Pseudomonas sp.: capabilities and challenges. J Appl Microbiol 123:582–593. https://doi.org/10.1111/jam.13472
doi: 10.1111/jam.13472
pubmed: 28419654
Tribedi P, Sil AK (2013) Low-density polyethylene degradation by Pseudomonas sp. AKS2 biofilm. Environ Sci Pollut Res 20:4146–4153. https://doi.org/10.1007/s11356-012-1378-y
doi: 10.1007/s11356-012-1378-y
Skariyachan S, Setlur AS, Naik SY et al (2017) Enhanced biodegradation of low and high-density polyethylene by novel bacterial consortia formulated from plastic-contaminated cow dung under thermophilic conditions. Environ Sci Pollut Res 24:8443–8457. https://doi.org/10.1007/s11356-017-8537-0
doi: 10.1007/s11356-017-8537-0
Ghatge S, Yang Y, Ahn JH, Hur HG (2020) Biodegradation of polyethylene: a brief review. Appl Biol Chem 63:27. https://doi.org/10.1186/s13765-020-00511-3
Kaushal J, Khatri M, Arya SK (2021) Recent insight into enzymatic degradation of plastics prevalent in the environment: a mini - review. Clean Eng Technol 2:100083. https://doi.org/10.1016/j.clet.2021.100083
doi: 10.1016/j.clet.2021.100083
Wei R, Zimmermann W (2017) Microbial enzymes for the recycling of recalcitrant petroleum-based plastics: how far are we? Microb Biotechnol 10:1308–1322. https://doi.org/10.1111/1751-7915.12710
doi: 10.1111/1751-7915.12710
pubmed: 28371373
pmcid: 5658625
Urbanek AK, Kosiorowska KE, Mirończuk AM (2021) Current knowledge on polyethylene terephthalate degradation by genetically modified microorganisms. Front Bioeng Biotechnol 9. https://doi.org/10.3389/fbioe.2021.771133
Alshehrei F (2017) Biodegradation of synthetic and natural plastic by microorganisms. J Appl Environ Microbiol 5:8–19. https://doi.org/10.12691/jaem-5-1-2
doi: 10.12691/jaem-5-1-2
Din MI, Ghaffar T, Najeeb J et al (2020) Potential perspectives of biodegradable plastics for food packaging application-review of properties and recent developments. Food Addit Contam: Part A 37:665–680. https://doi.org/10.1080/19440049.2020.1718219
doi: 10.1080/19440049.2020.1718219
Ilyas R, Zuhri M, Norrrahim M et al (2022) Natural fiber-reinforced polycaprolactone green and hybrid biocomposites for various advanced applications. Polym (Basel) 14:182. https://doi.org/10.3390/polym14010182
doi: 10.3390/polym14010182
Blackwell CJ, Haernvall K, Guebitz GM et al (2018) Enzymatic degradation of star poly(ε-caprolactone) with different central units. Polym (Basel) 10. https://doi.org/10.3390/polym10111266
Nevoralová M, Koutný M, Ujčić A et al (2020) Structure characterization and biodegradation rate of poly(ε-caprolactone)/starch blends. Front Mater 7. https://doi.org/10.3389/fmats.2020.00141
Yoon Y, Park H, An S et al (2023) Bacterial degradation kinetics of poly(Ɛ-caprolactone) (PCL) film by Aquabacterium sp. CY2-9 isolated from plastic-contaminated landfill. J Environ Manage 335:117493. https://doi.org/10.1016/j.jenvman.2023.117493
doi: 10.1016/j.jenvman.2023.117493
pubmed: 36822047
Thakur M, Majid I, Hussain S, Nanda V (2021) Poly(ε-caprolactone): a potential polymer for biodegradable food packaging applications. Packaging Technol Sci 34:449–461. https://doi.org/10.1002/pts.2572
doi: 10.1002/pts.2572
Nawaz A, Hasan F, Shah AA (2015) Degradation of poly(ɛ-caprolactone) (PCL) by a newly isolated Brevundimonas sp. strain MRL-AN1 from soil. FEMS Microbiol Lett 362:1–7. https://doi.org/10.1093/femsle/fnu004
doi: 10.1093/femsle/fnu004
pubmed: 25790487
Borghesi DC, Molina MF, Guerra MA, Campos MGN (2016) Biodegradation study of a novel poly-caprolactone-coffee husk composite film. Mater Res 19:752–758. https://doi.org/10.1590/1980-5373-MR-2015-0586
doi: 10.1590/1980-5373-MR-2015-0586
Fruteau De Laclos H, Hafner S, Holliger C (2018) Report on international inter-laboratory study on BMP tests. IOP Publishing PhysicsWeb. https://www.ktbl.de/fileadmin/user_upload/Allgemeines/Download/Ringversuch-Biogas/Report_Interlab-study_BMP-tests_February2018_korr.pdf . Accessed 31 Jan 2024
Holliger C, Astals S, de Laclos HF et al (2021) Towards a standardization of biomethane potential tests: a commentary. Water Sci Technol 83:247–250. https://doi.org/10.2166/wst.2020.569
doi: 10.2166/wst.2020.569
pubmed: 33460422
Stams AJM, Van Dijk JB, Dijkema C, Plugge CM (1993) Growth of syntrophic propionate-oxidizing bacteria with fumarate in the absence of methanogenic bacteria. Appl Environ Microbiol 59:1114–1119. https://doi.org/10.1128/aem.59.4.1114-1119.1993
doi: 10.1128/aem.59.4.1114-1119.1993
pubmed: 16348912
pmcid: 202247
Riffat R, Krongthamchat K (2006) Specific methanogenic activity of halophilic and mixed cultures in saline wastewater. Int J Environ Sci Technol 2:291–299. https://doi.org/10.1007/BF03325889
doi: 10.1007/BF03325889
Wang S, Hou X, Su H (2017) Exploration of the relationship between biogas production and microbial community under high salinity conditions. Sci Rep 7. https://doi.org/10.1038/s41598-017-01298-y
Moura I, Machado AV, Duarte FM, Nogueira R (2011) Biodegradability assessment of aliphatic polyesters-based blends using standard methods. J Appl Polym Sci 119:3338–3346. https://doi.org/10.1002/app.32966
doi: 10.1002/app.32966
Alves JI, Salvador AF, Castro AR et al (2020) Long-chain fatty acids degradation by desulfomonile species and proposal of “Candidatus desulfomonile palmitatoxidans.” Front Microbiol 11. https://doi.org/10.3389/fmicb.2020.539604
Silva AR, Duarte MS, Alves MM, Pereira L (2022) Bioremediation of perfluoroalkyl substances (PFAS) by anaerobic digestion: effect of PFAS on different trophic groups and methane production accelerated by carbon materials. Molecules 27. https://doi.org/10.3390/molecules27061895
Achinas S, Euverink GJW (2016) Theoretical analysis of biogas potential prediction from agricultural waste. Resource-Efficient Technol 2:143–147. https://doi.org/10.1016/j.reffit.2016.08.001
doi: 10.1016/j.reffit.2016.08.001
Salvador AF, Cavaleiro AJ, Paulo AMS et al (2019) Inhibition studies with 2-bromoethanesulfonate reveal a novel syntrophic relationship in anaerobic oleate degradation. Appl Environ Microbiol 85:e01733–e01718. https://doi.org/10.1128/AEM.01733-18
doi: 10.1128/AEM.01733-18
pubmed: 30366998
pmcid: 6328780
Caporaso JG, Lauber CL, Walters WA et al (2011) Global patterns of 16S rRNA diversity at a depth of millions of sequences per sample. Proc Natl Acad Sci 108:4516–4522. https://doi.org/10.1073/pnas.1000080107
doi: 10.1073/pnas.1000080107
pubmed: 20534432
Stoeck T, Bass D, Nebel M et al (2010) Multiple marker parallel tag environmental DNA sequencing reveals a highly complex eukaryotic community in marine anoxic water. Mol Ecol 19:21–31. https://doi.org/10.1111/j.1365-294X.2009.04480.x
doi: 10.1111/j.1365-294X.2009.04480.x
pubmed: 20331767
Li L, Lin X, Bao J et al (2022) Two extracellular poly(ε-caprolactone)-degrading enzymes from Pseudomonas hydrolytica sp. DSWY01T: purification, characterization, and Gene Analysis. Front Bioeng Biotechnol 10. https://doi.org/10.3389/fbioe.2022.835847
Almeida BC, Figueiredo P, Carvalho ATP (2019) Polycaprolactone enzymatic hydrolysis: a mechanistic study. ACS Omega 4:6769–6774. https://doi.org/10.1021/acsomega.9b00345
doi: 10.1021/acsomega.9b00345
Zampolli J, Vezzini D, Brocca S, Di Gennaro P (2024) Insights into the biodegradation of polycaprolactone through genomic analysis of two plastic-degrading Rhodococcus bacteria. Front Microbiol 14. https://doi.org/10.3389/fmicb.2023.1284956
Li W, Godzik A (2006) Cd-hit: a fast program for clustering and comparing large sets of protein or nucleotide sequences. Bioinformatics 22:1658–1659. https://doi.org/10.1093/bioinformatics/btl158
doi: 10.1093/bioinformatics/btl158
pubmed: 16731699
Notredame C, Higgins DG, Heringa J (2000) T-coffee: a novel method for fast and accurate multiple sequence alignment 1 1Edited by J. Thornton. J Mol Biol 302:205–217. https://doi.org/10.1006/jmbi.2000.4042
doi: 10.1006/jmbi.2000.4042
pubmed: 10964570
Eddy SR (2011) Accelerated Profile HMM searches. PLoS Comput Biol 7:e1002195
doi: 10.1371/journal.pcbi.1002195
pubmed: 22039361
pmcid: 3197634
Yagi H, Ninomiya F, Funabashi M, Kunioka M (2009) Anaerobic biodegradation tests of poly(lactic acid) and polycaprolactone using new evaluation system for methane fermentation in anaerobic sludge. Polym Degrad Stab 94:1397–1404. https://doi.org/10.1016/j.polymdegradstab.2009.05.012
doi: 10.1016/j.polymdegradstab.2009.05.012
Yagi H, Ninomiya F, Funabashi M, Kunioka M (2013) Thermophilic anaerobic biodegradation test and analysis of eubacteria involved in anaerobic biodegradation of four specified biodegradable polyesters. Polym Degrad Stab 98:1182–1187. https://doi.org/10.1016/j.polymdegradstab.2013.03.010
doi: 10.1016/j.polymdegradstab.2013.03.010
Jin Y, Cai F, Song C et al (2022) Degradation of biodegradable plastics by anaerobic digestion: morphological, micro-structural changes and microbial community dynamics. Sci Total Environ 834:155167. https://doi.org/10.1016/j.scitotenv.2022.155167
doi: 10.1016/j.scitotenv.2022.155167
pubmed: 35421475
Narancic T, Verstichel S, Reddy Chaganti S et al (2018) Biodegradable plastic blends create new possibilities for end-of-life management of plastics but they are not a panacea for plastic pollution. Environ Sci Technol 52:10441–10452. https://doi.org/10.1021/acs.est.8b02963
doi: 10.1021/acs.est.8b02963
pubmed: 30156110
Selke S, Auras R, Nguyen TA et al (2015) Evaluation of biodegradation-promoting additives for plastics. Environ Sci Technol 49:3769–3777. https://doi.org/10.1021/es504258u
doi: 10.1021/es504258u
pubmed: 25723056
Hermanová S, Šmejkalová P, Merna J, Zarevúcka M (2015) Biodegradation of waste PET based copolyesters in thermophilic anaerobic sludge. Polym Degrad Stab 111:176–184. https://doi.org/10.1016/j.polymdegradstab.2014.11.007
doi: 10.1016/j.polymdegradstab.2014.11.007
Mohanan N, Montazer Z, Sharma PK, Levin DB (2020) Microbial and enzymatic degradation of synthetic plastics. Front Microbiol 11:. https://doi.org/10.3389/fmicb.2020.580709
Al Hosni AS, Pittman JK, Robson GD (2019) Microbial degradation of four biodegradable polymers in soil and compost demonstrating polycaprolactone as an ideal compostable plastic. Waste Manag 97:105–114. https://doi.org/10.1016/J.WASMAN.2019.07.042
doi: 10.1016/J.WASMAN.2019.07.042
pubmed: 31447017
Pradhan R, Reddy M, Diebel W et al (2010) Comparative compostability and biodegradation studies of various components of green composites and their blends in simulated aerobic composting bioreactor. Int J Plast Technol 14. https://doi.org/10.1007/s12588-010-0009-z
Wang G, Huang D, Ji J et al (2021) Seawater-degradable polymers—fighting the marine plastic pollution. Adv Sci 8. https://doi.org/10.1002/advs.202001121
Wang W, Tao J, Yu K et al (2021) Vertical stratification of dissolved organic matter linked to distinct microbial communities in subtropic estuarine sediments. Front Microbiol 12. https://doi.org/10.3389/fmicb.2021.697860
Zhao R, Liu J, Feng J et al (2021) Microbial community composition and metabolic functions in landfill leachate from different landfills of China. Sci Total Environ 767:144861. https://doi.org/10.1016/j.scitotenv.2020.144861
doi: 10.1016/j.scitotenv.2020.144861
pubmed: 33422962
Gomes E, de Souza AR, Orjuela GL et al (2016) Applications and benefits of thermophilic microorganisms and their enzymes for industrial biotechnology. In: Schmoll M, Dattenböck C (eds) Gene expression systems in Fungi: advancements and applications. Springer International Publishing, Cham, pp 459–492
doi: 10.1007/978-3-319-27951-0_21
Atanasova N, Stoitsova S, Paunova-Krasteva T, Kambourova M (2021) Plastic degradation by extremophilic bacteria. Int J Mol Sci 22:5610. https://doi.org/10.3390/ijms22115610
doi: 10.3390/ijms22115610
pubmed: 34070607
pmcid: 8198520
Tokiwa Y, Calabia B, Ugwu C, Aiba S (2009) Biodegradability of plastics. Int J Mol Sci 10:3722–3742. https://doi.org/10.3390/ijms10093722
doi: 10.3390/ijms10093722
pubmed: 19865515
pmcid: 2769161
Heimowska A, Morawska M, Bocho-Janiszewska A (2017) Biodegradation of poly(ϵ-caprolactone) in natural water environments. Pol J Chem Technol 19:120–126. https://doi.org/10.1515/pjct-2017-0017
doi: 10.1515/pjct-2017-0017
Woodruff MA, Hutmacher DW (2010) The return of a forgotten polymer—polycaprolactone in the 21st century. Prog Polym Sci 35:1217–1256. https://doi.org/10.1016/J.PROGPOLYMSCI.2010.04.002
doi: 10.1016/J.PROGPOLYMSCI.2010.04.002
Kato S, Kosaka T, Watanabe K (2008) Comparative transcriptome analysis of responses of Methanothermobacter thermautotrophicus to different environmental stimuli. Environ Microbiol 10:893–905. https://doi.org/10.1111/j.1462-2920.2007.01508.x
doi: 10.1111/j.1462-2920.2007.01508.x
pubmed: 18036179
Liczbiński P, Borowski S, Nowak A (2022) Isolation and use of Coprothermobacter spp. to improve anaerobic thermophilic digestion of grass. Molecules 27:4338. https://doi.org/10.3390/molecules27144338
doi: 10.3390/molecules27144338
pubmed: 35889215
pmcid: 9319358
Gagliano MC, Braguglia CM, Petruccioli M, Rossetti S (2015) Ecology and biotechnological potential of the thermophilic fermentative Coprothermobacter spp. FEMS Microbiol Ecol 91:fiv018. https://doi.org/10.1093/femsec/fiv018
doi: 10.1093/femsec/fiv018
pubmed: 25764466
Anne HE, M KD, K MR, et al (2019) Complete genome sequence of Caloramator sp. strain E03, a novel ethanologenic, thermophilic, obligately anaerobic bacterium. Microbiol Resour Announc 8. https://doi.org/10.1128/mra.00708-19
Ahlert S, Zimmermann R, Ebling J, König H (2016) Analysis of propionate-degrading consortia from agricultural biogas plants. Microbiologyopen 5:1027–1037. https://doi.org/10.1002/mbo3.386
doi: 10.1002/mbo3.386
pubmed: 27364538
pmcid: 5221444
Oh Y-R, Jang Y-A, Song JK, Eom GT (2022) Efficient enzymatic depolymerization of polycaprolactone into 6-hydroxyhexanoic acid by optimizing reaction conditions and microbial conversion of 6-hydroxyhexanoic acid into adipic acid for eco-friendly upcycling of polycaprolactone. Biochem Eng J 185:108504. https://doi.org/10.1016/j.bej.2022.108504
doi: 10.1016/j.bej.2022.108504
Carlson CA, Ingraham JL (1983) Comparison of denitrification by Pseudomonas stutzeri, Pseudomonas aeruginosa, and Paracoccus denitrificans. Appl Environ Microbiol 45:1247–1253. https://doi.org/10.1128/aem.45.4.1247-1253.1983
doi: 10.1128/aem.45.4.1247-1253.1983
pubmed: 6407395
pmcid: 242446
Vander Wauven C, Piérard A, Kley-Raymann M, Haas D (1984) Pseudomonas aeruginosa mutants affected in anaerobic growth on arginine: evidence for a four-gene cluster encoding the arginine deiminase pathway. J Bacteriol 160:928–934. https://doi.org/10.1128/jb.160.3.928-934.1984
doi: 10.1128/jb.160.3.928-934.1984
pubmed: 6438064
pmcid: 215798
Eschbach M, Schreiber K, Trunk K et al (2004) Long-term anaerobic survival of the opportunistic pathogen Pseudomonas aeruginosa via pyruvate fermentation. J Bacteriol 186:4596–4604. https://doi.org/10.1128/JB.186.14.4596-4604.2004
doi: 10.1128/JB.186.14.4596-4604.2004
pubmed: 15231792
pmcid: 438635
Arai H (2011) Regulation and function of versatile aerobic and anaerobic respiratory metabolism in Pseudomonas aeruginosa. Front Microbiol 2. https://doi.org/10.3389/fmicb.2011.00103
Glasser NR, Kern SE, Newman DK (2014) Phenazine redox cycling enhances anaerobic survival in Pseudomonas aeruginosa by facilitating generation of ATP and a proton-motive force. Mol Microbiol 92:399–412. https://doi.org/10.1111/mmi.12566
doi: 10.1111/mmi.12566
pubmed: 24612454
pmcid: 4046897
Ciemniecki JA, Newman DK (2020) The potential for redox-active metabolites to enhance or unlock anaerobic survival metabolisms in aerobes. J Bacteriol 202. https://doi.org/10.1128/JB.00797-19
Wu K-J, Wu C-S, Chang J-S (2007) Biodegradability and mechanical properties of polycaprolactone composites encapsulating phosphate-solubilizing bacterium Bacillus sp. PG01. Process Biochem 42:669–675. https://doi.org/10.1016/j.procbio.2006.12.009
doi: 10.1016/j.procbio.2006.12.009
Tiago I, Teixeira I, Silva S et al (2004) Metabolic and genetic diversity of mesophilic and thermophilic bacteria isolated from composted municipal sludge on poly-ε-caprolactones. Curr Microbiol 49:407–414. https://doi.org/10.1007/s00284-004-4353-0
doi: 10.1007/s00284-004-4353-0
pubmed: 15696616
Malunavicius V, Padaiga A, Stankeviciute J et al (2023) Engineered Geobacillus lipolytic enzymes – attractive polyesterases that degrade polycaprolactones and simultaneously produce esters. Int J Biol Macromol 253:127656. https://doi.org/10.1016/j.ijbiomac.2023.127656
doi: 10.1016/j.ijbiomac.2023.127656
pubmed: 37884253
Liu J, He J, Xue R et al (2021) Biodegradation and up-cycling of polyurethanes: progress, challenges, and prospects. Biotechnol Adv 48:107730. https://doi.org/10.1016/j.biotechadv.2021.107730
doi: 10.1016/j.biotechadv.2021.107730
pubmed: 33713745
Magnin A, Pollet E, Phalip V, Avérous L (2020) Evaluation of biological degradation of polyurethanes. Biotechnol Adv 39:107457. https://doi.org/10.1016/j.biotechadv.2019.107457
doi: 10.1016/j.biotechadv.2019.107457
pubmed: 31689471
Antipova TV, Zhelifonova VP, Zaitsev KV et al (2018) Biodegradation of poly-ε-caprolactones and poly-l-lactides by fungi. J Polym Environ 26:4350–4359. https://doi.org/10.1007/s10924-018-1307-3
doi: 10.1007/s10924-018-1307-3
Pardo-Rodríguez ML, Zorro-Mateus PJP (2021) Biodegradation of polyvinyl chloride by Mucor s.p. and Penicillium s.p. isolated from soil. Revista De Investigación Desarrollo E Innovación 11:387–400. https://doi.org/10.19053/20278306.v11.n2.2021.12763
doi: 10.19053/20278306.v11.n2.2021.12763
Al Hosni AS (2019) Biodegradation of polycaprolactone bioplastic in comparision with other bioplastics and its impact on biota. Dissertation, University of Manchester
Adekunle AA, Oluyode TF (2005) Biodegradation of crude petroleum and petroleum products by fungi isolated from two oil seeds (melon and soybean). J Environ Biol 26:37–42
pubmed: 16114459
Brzezinska MS, Walczak M, Burkowska-But A et al (2019) Antifungal activity of polyhexamethyleneguanidine derivatives introduced into biodegradable polymers. J Polym Environ 27:1760–1769. https://doi.org/10.1007/s10924-019-01472-5
doi: 10.1007/s10924-019-01472-5
Nakajima-Kambe T, Edwinoliver NG, Maeda H et al (2012) Purification, cloning and expression of an Aspergillus niger lipase for degradation of poly(lactic acid) and poly(ε-caprolactone). Polym Degrad Stab 97:139–144. https://doi.org/10.1016/j.polymdegradstab.2011.11.009
doi: 10.1016/j.polymdegradstab.2011.11.009